Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04015 ATGGTGGTAGCTGCAGGTTCTAAGTTCAGTTTAAGAAGAGGAAACAGTGGTTCGTGTTCTTCTAATAATGTTGTTATTAATGAAGAACTTTCTAGAATTAATAATAAAACTGCTTCTTTTTCTCAAGACCCTTCTTGTGTTTCATTCACTACTTTCAACATCCTTGCTCCTATTTACAAAAGGATTGATCCACAGAATCAAGGACTTAGAGAAAGTGACTTCAGATCATGTTGGTTAGCTAGGAATCAAAGGATTCTTGATTCATTGCTTTCTGAATCGTCTTCTATTATGTGCTTACAGGAATTTTGGGTTGGAAATGAAGAACTTGTTCACATGTTTGAGGAGAGACTTGGGGATGCTGGTTATCAACTCTTCAAGCTTGCTCGAACCAACAACCGCGGAGATGGTTTGCTGACTGCTATACATAAAGAATACTTGAGTATTGTGAATTATCAAGAGTTGCTTTTCAACGATTGCGGTGACCGTGTTGCTCAGTTGTTACATGTTCGATCAGTTAATCCCATTTTACAAAACCAAAAAGACAGTGTTCACCAAGAGTTTCTGATTGTGAATACTCACTTGCTATTTCCTCATGATTCAAGTCTGTGTATAGTGAGATTGGATCAGGTTTATCAAATATTAAAATATGTGGAACAGTATCAGAAAGAAAATAGACTCAAACCAATGCCTATTATACTTTGTGGTGACTGGAACGGAAGCAAGCGTGGGCATGTTTACAAGTTCCTAAGGTCACAGGGATTTGTATCATCATATGATATAGCAAATCAATATACTGATAGTTATGCAGATGCACACAAGTGGGTTAGTCACAGAAATCATAGAGGAAATATATGTGGCGTTGACTTCATTTGGCTTTGCAATCCTAACCAAGCGCGTAAGCCTTTGAAAACAAGTTGGTCTGAAGCTGTATTTAGTATACTGAAGTTCCAGCTTCGAAAGGCGTCATTGTCTGAAGATGATGCATTTACCTTTCTGAAGGGTGACAACTATGCTGATTCTTCTGTGACATATCTTAGTTTTTCTGAAGCCCTCCGTCAGGTAAAGTTATTTGGTGTGCCTTATGGATTATGCTTTCAACAGTTGCAAGATCTATGGAATCAAGCTGACGTAGATGGAAATGGTGTCATCGACTTCGAAGAATTCAAGAAAAAGATTTGGAATTCTACATGTTCAGAGCATGTGTCTGAAAATGTCAATGCGTACGTGAAGGATTCTAATACTGAGCAGGAGCAAGAAACCATTGGTTTTAAGGTGAAGAACGCGATGTTGTTTCCGCGTGAAATGGAGAAAGGACTTTGGCCTGAAGATTACTCTCTTTCTGATCATGCTAGGTTAACTGCTGTATTTTCACCGGCAAAGATGTCATGTTCTTCATTATAA 1401 0.3826 MVVAAGSKFSLRRGNSGSCSSNNVVINEELSRINNKTASFSQDPSCVSFTTFNILAPIYKRIDPQNQGLRESDFRSCWLARNQRILDSLLSESSSIMCLQEFWVGNEELVHMFEERLGDAGYQLFKLARTNNRGDGLLTAIHKEYLSIVNYQELLFNDCGDRVAQLLHVRSVNPILQNQKDSVHQEFLIVNTHLLFPHDSSLCIVRLDQVYQILKYVEQYQKENRLKPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDIANQYTDSYADAHKWVSHRNHRGNICGVDFIWLCNPNQARKPLKTSWSEAVFSILKFQLRKASLSEDDAFTFLKGDNYADSSVTYLSFSEALRQVKLFGVPYGLCFQQLQDLWNQADVDGNGVIDFEEFKKKIWNSTCSEHVSENVNAYVKDSNTEQEQETIGFKVKNAMLFPREMEKGLWPEDYSLSDHARLTAVFSPAKMSCSSL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04015 466 ProSitePatterns EF-hand calcium-binding domain. 376 388 IPR018247 -
Mepo1g04015 466 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 20 456 - -
Mepo1g04015 466 Pfam Endonuclease/Exonuclease/phosphatase family 78 261 IPR005135 GO:0003824
Mepo1g04015 466 SUPERFAMILY DNase I-like 40 270 IPR036691 -
Mepo1g04015 466 SUPERFAMILY EF-hand 344 392 IPR011992 -
Mepo1g04015 466 Gene3D Endonuclease/exonuclease/phosphatase 23 462 IPR036691 -
Mepo1g04015 466 ProSiteProfiles EF-hand calcium-binding domain profile. 363 398 IPR002048 GO:0005509
Mepo1g04015 466 FunFam Putative calcium-binding protein 32 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04015 Mepo-Chr1 46702376 46707045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04015 112 464 EF-hand Containing Proteins AT1G02270 65.439 2.81e-172 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04015 - - tpra:123884643 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04015 1 46702376 46707045 Mepo1g04015 1 46702376 46707045 ECH