Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03990 ATGTCGTTCACTGCAACAAAATTCTCACACTCTCTTCTTGCTGTTCCTATCAATTCTTCAACTCCAAGATCCAATGATAAACCACTTTCTTTCTCTTCTGATCTCTTCAAACACAACCCTTCTTCTTCCTCTTTTCTTGGATCTACTCAGAAGCTTCTTCGTTTGAATGCTCGCCGTTCATCACCACCTGTTGCTGCTGTTCTTCTTCAACAAACCTCCAATTTGCTTATTACTAAAGAGGAAGGGTTGGTGCTTTATGAAGACATGGTATTAGGGAGGTCCTTTGAAGACAAATGTGCTGAGATGTATTATAGGGGTAAAATGTTTGGTTTTGTCCACTTATACAATGGACAAGAAGCTGTGTCAACTGGATTCATCAAGTATTTGAGGAAAGAAGATTGCATAGTGAGCACATACAGAGACCATGTTCACGCGTTGAGTAAAGGGGTCCCTTCTCGAGAAGTGATGAGTGAACTCTTCGGTAAGGCGACAGGATGTTGCCGAGGTCAGGGTGGTTCAATGCATATGTTCTCAAAAGAACATAACGTGCTCGGTGGTTTTGCATTCATCGGTGAAGGAATTCCAGTGGCCACCGGTGCTGCATTTTCCATGAAGTACAAAAGAGAGGTGTTGAATCAGGCTGATTCCGATAACGTGACATTGGCATTTTTCGGAGATGGAACTTGTAATAATGGACAGTTCTTTGAGTGTTTAAACATGGCGGCTTTGTGGAAATTACCAATTGTGTTTGTGGTGGAAAACAATTTGTGGGCCATTGGGATGTCACATCTTAGAGCAACTTCAGATCCTCAGATATGGAAAAAGGGTCCAGCGTTCGGAATGCCAGGTGTTCATGTCGATGGGATGGATGTTTTGAAGGTCAGAGAAGTGGCGAAGGAGGCAATTGACAGGGCTAGAAGAGGAGAAGGACCAACTTTAGTGGAATGCGAGACCTACAGATTTAGAGGACATTCATTGGCTGATCCTGATGAGCTTCGTAACCCCGCTGAGAAGGAACACTATGCTGGAAGGGATCCCATCACTGCATTGAAGAAATATCTTTTTGAGAACAAACTAGCCACTGAACAAGAATTGAAGGCAATAGACAAGAAAATTGACGAGGTCCTTGAGGAAGCTGTTGATTTCGCAGAAAAGAGCCCTGCACCACCTCGCAGCCAGCTTCTAGAGAATGTCTTCGCCGATCCAAAAGGTTTTGGAATTGGACCAGATGGAAGGTATAGATGCGAGGATCCAAAGTTTACTGAAGGCACTGCTCATGTCTAA 1284 0.4377 MSFTATKFSHSLLAVPINSSTPRSNDKPLSFSSDLFKHNPSSSSFLGSTQKLLRLNARRSSPPVAAVLLQQTSNLLITKEEGLVLYEDMVLGRSFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGFIKYLRKEDCIVSTYRDHVHALSKGVPSREVMSELFGKATGCCRGQGGSMHMFSKEHNVLGGFAFIGEGIPVATGAAFSMKYKREVLNQADSDNVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIDRARRGEGPTLVECETYRFRGHSLADPDELRNPAEKEHYAGRDPITALKKYLFENKLATEQELKAIDKKIDEVLEEAVDFAEKSPAPPRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTAHV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03990 427 Gene3D - 32 408 - -
Mepo1g03990 427 NCBIfam pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 80 400 IPR017597 GO:0004739|GO:0006086|GO:0043231
Mepo1g03990 427 FunFam Pyruvate dehydrogenase E1 component subunit alpha 49 408 - -
Mepo1g03990 427 CDD TPP_E1_PDC_ADC_BCADC 85 383 - -
Mepo1g03990 427 Coils Coil 358 378 - -
Mepo1g03990 427 Pfam Dehydrogenase E1 component 88 389 IPR001017 GO:0016624
Mepo1g03990 427 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 73 402 IPR029061 -
Mepo1g03990 427 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 70 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03990 Mepo-Chr1 46422289 46426536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03990 43 427 Acyl Lipid Metabolism Gene Families AT1G01090 82.576 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03990 K00161 - gmx:100811207 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03990 1 46422289 46426536 Mepo1g03990 1 46422289 46426536 ECH