Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03989 ATGGAGCTCGACCTCTGCTCTTTCCTTCCCGACGACACCGAAACCGAAACCGATCTCCCTCCCACTCATCACCGTACTGTCGACGAAATTCTCAATGACTGCTCTTCTTCCTCATCACCCTCTTCTTCTCCACCTTCTTCTCCTTCTAATAACAAATCCACTAACTTTCCTCAACCCACACCCGTTTCCATTTCGGGTCGGGTTTCACAGAATGTCAGGATCGGTGATAAACCTCCGCGTCCGCGTGTTTTTTCGTCGTTGTTTGGTCGAGTTACACCGAATGCCAAACCCGGTGCTGCTCTTGCTGCTGCTGCTGCCGCGTCGAGATCTGTTCCGACTCCACATGCTGCTGCGATTATGCACCGGAGGAGAATTTCGAATTCGATTAAATCTGAATCGGATATTTCTGATGTTTTGAGTGAATTTGGTGACAAAATTGAGAGGAGTGTCAGTGTTGGTGATGTTGATTTCAGAGGTGGTGAATTGAGGGAGAGATTTGGGGGTTTTGTGGAGAGGAGTGAAAGTGTTGGAATTGATGCAATTGAAGTGAATGAAGATGATGTGAATGTGAAGAGTGATTTAGATGAGTGTTTTGTTTCTAATTTGTTGAATTCTGTTGAAAATAGACATGATCATGATGATAAGTGTTTGGAACCTACAAATTCTACACATTTTGATGTTGTAAGTGGTGAAAATGGTCATGATCATGATGATAGTAAGGGTTTGAATTCTGCATCTTTTGATGTTGTTGTTGATGATGATGAAAAAAGTAGTTTTGATTATGTTGGTGATAATGGTATCAATGAAACAGAAGAAATTGTGAATGGTATTGGTGTTGGTGTCAGTGGTGGTTTTGTTGAAGGTATTGAGAATGAAGTGAATGATGATGATGGTAGTGGCAATGGTGAAGGTATTGAGAATGAAGATAATGGTGACGATGGTGGTGGTGGCGGTGATGATGGTAGTTCCATTGGTGATGTTTTTGAGCTAGTGGAGGAAACACTTGAGCAATTGGAATTAGAAAGTAAAAGGGTTACAAAGAAAAAATTAGATTCTTCGAAGAAGCCGCTGGACTTAGCTGAGGAACTGGAGAAGAAGAATGCTTCAACGGGTTTACATTTAGAAGAGGGTGCTGCTGCGCAGCCGATGAGACTTGAGGGTGTACGGAGAGGGTCTATTACATTAGGTTATTTTGATGTTGATGCGGATAATGCAATCACGAGGGTCATTTCATCGCAAAATTTTAGGCGTGAGCATGGTTCTGCTCAAGTTTTGGTAGTTCATGCTAATTACATTGCAGTTGGAATGACAAGAGGGCTTATTGTTGTAGTTCCTAGTAAATATTCCATTCATCATGCGGATAATACGGATGGAAAGATGTTGATGCTTGGTATACAAGGTGATCGATCACAAGCTCCAGTGACATCCATGTCTTTCAATCAACAAGGAGATCTTCTTTTAGCTGGTTATGGTGATGGTCATGTTACGCTTTGGGATGTACAGAAAGGGGTAGTGGTAAAAGTTATAAGTGGAGAGCATACGGCACCAGTGGTACATGCTTTTTTTCTAGGACAGGATCCTCAGAATACTCGTCAATTTAAAGCAGTTACGGGGGATTGCAAGGGTCTGGTTCTCTTGCATCATATCTCAGTGGTTGTTTTGATTAATAGGTTCAACTTCAAAACTCAGTGTCTTCTTGATGGGCAAAATACTGGTTTGGTGCTATCTGCTTCACCCCTCTTTTCTGGCGAATTCGGAGGAAGTCCTTCTTATTCTCAAGGAAACACCATGGTCTCGGCCAGCAGTATAAGTAGCATGGTCGGGGGTGTTGTTGGGGGAGATGCAGGTTGGAAACTCTTCAACGAGGGCTCTTCTCTGGTTGAAGAAGGTGTGGTTGTATTTGTCACCCATCAAACTGCTTTGGTGGTACGACTCAGTCCTTCATTGGTAGCCTATGCTCAACTCCCTAGGCCAAATGGAATTCGGGAGGGTTCTATGCCATATACTGCATGGAAATACATGACACAAACAAGTAGTTCTACTGATAATGCGTCTGCAGAAACTGTTGAAAGAGTTTCATTGCTTGCAATTGCTTGGGAACGCAAAGTTCAGGTTGCAAGGTTGATCAAATCAGAATTAAAGGTATATGGAGAATGGTCTCTTGACAGTGCAGCTATAGGTCTGGCATGGTTGGATGATCAGATGCTTGTAGTTCTCACTTCAACCGGACAACTGAATTTATTTGCCAAGGATGGAACTGTGATTCACCAAACAAGTTTTGGTATAGATGGTATTGGAGGAGACGAACTGCTTTCGTATCATACGCACTTCATCAACATATATGGAAATCCTGAGAAAGCTTATCATAACGCCATTGCTGTAAGAGGAACTTCTGTTTATATACTTGGTCCAACACATCTTATTATTTCTCGTCTTCTCCCTTGGAAAGAACGTATCTTGGTTTTACGGAAAGCAGGTGACTGGATGGGTGCCTTGAACATGGCAATGACTCTTTATGATGGCCATGCTCATGGGGTTGTTGATCTACCTAGAACCTTGGATGCTATACATGAGGCTATAATGCCCTTCTTGGAGGAGTTGCTTACATCATATGTTGAAGAGGTGTTCTCCTATATTTCTGTGGCTTTCTGCAACCAAATTGGAAAACCTGATCAATCCAATGATTCAAATAGTATAAGCAATTCAGTGCATTCTGAAATAAAGGAGCAATACACCCGTGTTGGTGGCGTTGCTGTTGAATTTTGTTGTCATATCAAACGGACAGACATCCTTTTTGATAAAATTTTCTCCAAGTTTGTGGATGTTCATGTTCAACAGAGAGAAACATTTTTGGAGCTTCTGGAGCCATATATTTTGAAGGACATGCTTGGATCTCTACCTCCCGAGATTATGCAAGAACTGGTAAAGTATTATAGCACGAAAGGGTGGTTGCAGCGGGTTGAACAATGTGTACTTCACATGGATATTTCATCATTGGATTTTAATCAGGTTGTCAGATTGTGCCGGGAGCATGGACTATATAGTGCCCTGGTGTATCTCTTCAATAAAGGATTAGATGATTTTAGGGCACCTCTTGAGGAGCTCTTTACAGTCCTACAAAATAGCCAGAAGGAAAATGCTACTGCACTTGGGTATAGAATGCTGGTTTATCTCAAGTACTGCTTTACAGGTCTTGCCTTTCCACCAGGCCATGGAATTATTCCTCCTATGCGATTGCCATCTCTCAGAAAAGAACTTGTAGAGTTTTTGTTAGAAGATTCCAGTGCTACAAAATCACGGATAGTTTCAGATTCTGTGTCCAAACTGCCATACCTGAATCTATATCTTCTCTTAGAGTTAGACACTGAAGCTACATTAGATGTCCTTCGATGTGCTTTCGTTGAAGATAAAATTTCAAATTCCAGCTCATCTTCACTGGAATCAGCTGATAGACCTATTGAAGAAACGAAAGAAGAAAATAATAATGTCACTGAAACTGACAATATTTTAGTTCAGAATACAGTGGATGCTCTTATTCAAATAATTGATATGAATGTTGTTCCGACAGATACAACCTCTAGTAGTGGTGACGACGGATTAACAATGGAGTGGCCTTTGAAGGACAAAGGTTGTCTGTTTGAGTTTATTGCATATTATGTTGCTCACCAAAGAGCTAAAGTTTCAAAGGGCATGCTTTGTCAGATATTGGAATATCTGACATTGGATAACCACTTTTCAACTAATGTTTCTTCTCATAGTTCAACTCCAAAAAGTAGAGAGAAGCAAGTGCTTGCACTTCTGGAAGTAGTTCCCGAGTCCGACTGGGATGTGCCATTTTTGCTAGACCTATGTGAGAGCGCCAAATATTATCAGGTTTGCGGATTGATTCATTCCATCAGACATGAGTATGTGGCTGCATTGGACAGCTATATGAAGGATGTAAATGAGCCGGTTCATGCCTTCTCCTTTATCAACAAAGCATTCTCACTGTTGATTGGCAATGACCGAACTGCTATCCGATCAGCAGTCCTATCTCGAATTCCTGAATTGGTTGAACTCAGCAGGGAAGGTGCATTCCATATGGTTACCAGACATTTTAGTGATGAAAGTTCCCATGTCATCACTAAACTTCATTCTCACCCAAGAAGTCTTTTCCTTTATTTAAAGACACTCATTGAGCTTCACTTATTTGGCACCCTAGACTTGTCTCATTTGACAAAGGGTGTTATTACAAATCCCCCTAATGGAAAGCAGATTAAGGATCCTCCACAAAGAATCCATGATTACTTAGAAAATATATCCGATTTCCCCAAGTACATGCGTGAAAATCCTAGTCATGTGCCTGATGATCTTATTGAGCTTTACCTAAAGCTGTTATGCCAGTATGAACGGGGTTCAGTTCTAAAGTTTCTAGAAATGTTCGATAGCTATCGTGTGGAACATTGTTTACGCCTATGCCAAGAATATGGCATTATAGATGCTGCTGCTTTCTTATTGGAAAGGGTTGGTGATGTTGGTAGTGCTCTTTCACTTACACTTTCTGATCTAAATGATAAATTTGTTGAGCTTGATGCTGCTGTGGAAGCTGTAGTTTCAAACCATCCTAAGCTTGATTCTTCCCATATAGACGTATACAACACTGTTTTAAAGACAAAAGAGGTGAATTTCATGTACGATTTATTGCATGCCTGTATCGGTCTGTGTCAGCGTAACACGCCTCGTCTAAATCCTGAGGAGTCAGAAGCACACTGGTTTAAATTACTTGACTCGTTTTGTGATCCATTGATGGATTCATATGTTGAAGAGAAATCATATGAAAGGAAAAATTATTTTGGTGTTCTAGCCGGATCAGCAGATTCACAACTGGACAAAGACACCTATAAAAGCAATTGGAAGATTTCAAAGTCCCGAAATGGTGATATCTTGAGAAAATTGATATCCCAGTTCATTAAAGAGATTGTTGAGGGAATGATAGGTTATGTTCACCTTCCAGCTATCATGTCCAAACTCTTGAGTGATAATGGTAGTCAAGAATTTGGCTATTTTAAACTTACCATATTGGGGATGCTTGGAACGTATGGCTTTGAAAAAAGAATTCTGGATGCTGCCAAGTCCTTGATAGAGGATGATACATTCTATACCATGACTTTACTCAAGAAAGGGGCTTCTCATGGATTTGCTCCCAGGAGTTCAGTGTGTTGTATATGTAATTGCCTCCTAACAAAGAACTCAGTTACTACTGGAATTCGAATTTTCAACTGTGGCCATGCAATTCATCTCCATTGTGAAGCCTCTGAAGTCGAGTCGTCAAGCAAAGCATCTTCGTCTGGATGCCCTGTATGTATGCCTATCCAAAAACCCCAGAAGTCTAGAAACAAATCTATAATTACAGAGAATGGCTTAGTCAATAAATTCTCATCAAGACGCCAATACCCTCATGGAAGTACAAGTCATCACCACCATGACAGTGATTTATCAGAGAATATGTATGGAGGACAGCAACAGATATCACGGTTTGAGATCTTGAGCAGCTTGCAGAAAAATCAAAGATTTATGCAATTTGAAAACTTGCCTCCATTGAGGCTTGCCCCACCTGCTGTGTACCATGAAAAGGTGAGTAAAGTAGCACACTATCAGACTGGAGAAAGTAGCAACAATTCTGCAGTTATAGATAAACATAGTCGTCACAAACAAAACCGGGATCTGAGAGTCAGAGGTTCATCGATTCGTTTTCCTTTAAAATCAAGTTTTTTTGGCAAGGAAAAGACAAATAAGCGATGA 5781 0.4079 MELDLCSFLPDDTETETDLPPTHHRTVDEILNDCSSSSSPSSSPPSSPSNNKSTNFPQPTPVSISGRVSQNVRIGDKPPRPRVFSSLFGRVTPNAKPGAALAAAAAASRSVPTPHAAAIMHRRRISNSIKSESDISDVLSEFGDKIERSVSVGDVDFRGGELRERFGGFVERSESVGIDAIEVNEDDVNVKSDLDECFVSNLLNSVENRHDHDDKCLEPTNSTHFDVVSGENGHDHDDSKGLNSASFDVVVDDDEKSSFDYVGDNGINETEEIVNGIGVGVSGGFVEGIENEVNDDDGSGNGEGIENEDNGDDGGGGGDDGSSIGDVFELVEETLEQLELESKRVTKKKLDSSKKPLDLAEELEKKNASTGLHLEEGAAAQPMRLEGVRRGSITLGYFDVDADNAITRVISSQNFRREHGSAQVLVVHANYIAVGMTRGLIVVVPSKYSIHHADNTDGKMLMLGIQGDRSQAPVTSMSFNQQGDLLLAGYGDGHVTLWDVQKGVVVKVISGEHTAPVVHAFFLGQDPQNTRQFKAVTGDCKGLVLLHHISVVVLINRFNFKTQCLLDGQNTGLVLSASPLFSGEFGGSPSYSQGNTMVSASSISSMVGGVVGGDAGWKLFNEGSSLVEEGVVVFVTHQTALVVRLSPSLVAYAQLPRPNGIREGSMPYTAWKYMTQTSSSTDNASAETVERVSLLAIAWERKVQVARLIKSELKVYGEWSLDSAAIGLAWLDDQMLVVLTSTGQLNLFAKDGTVIHQTSFGIDGIGGDELLSYHTHFINIYGNPEKAYHNAIAVRGTSVYILGPTHLIISRLLPWKERILVLRKAGDWMGALNMAMTLYDGHAHGVVDLPRTLDAIHEAIMPFLEELLTSYVEEVFSYISVAFCNQIGKPDQSNDSNSISNSVHSEIKEQYTRVGGVAVEFCCHIKRTDILFDKIFSKFVDVHVQQRETFLELLEPYILKDMLGSLPPEIMQELVKYYSTKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYSALVYLFNKGLDDFRAPLEELFTVLQNSQKENATALGYRMLVYLKYCFTGLAFPPGHGIIPPMRLPSLRKELVEFLLEDSSATKSRIVSDSVSKLPYLNLYLLLELDTEATLDVLRCAFVEDKISNSSSSSLESADRPIEETKEENNNVTETDNILVQNTVDALIQIIDMNVVPTDTTSSSGDDGLTMEWPLKDKGCLFEFIAYYVAHQRAKVSKGMLCQILEYLTLDNHFSTNVSSHSSTPKSREKQVLALLEVVPESDWDVPFLLDLCESAKYYQVCGLIHSIRHEYVAALDSYMKDVNEPVHAFSFINKAFSLLIGNDRTAIRSAVLSRIPELVELSREGAFHMVTRHFSDESSHVITKLHSHPRSLFLYLKTLIELHLFGTLDLSHLTKGVITNPPNGKQIKDPPQRIHDYLENISDFPKYMRENPSHVPDDLIELYLKLLCQYERGSVLKFLEMFDSYRVEHCLRLCQEYGIIDAAAFLLERVGDVGSALSLTLSDLNDKFVELDAAVEAVVSNHPKLDSSHIDVYNTVLKTKEVNFMYDLLHACIGLCQRNTPRLNPEESEAHWFKLLDSFCDPLMDSYVEEKSYERKNYFGVLAGSADSQLDKDTYKSNWKISKSRNGDILRKLISQFIKEIVEGMIGYVHLPAIMSKLLSDNGSQEFGYFKLTILGMLGTYGFEKRILDAAKSLIEDDTFYTMTLLKKGASHGFAPRSSVCCICNCLLTKNSVTTGIRIFNCGHAIHLHCEASEVESSSKASSSGCPVCMPIQKPQKSRNKSIITENGLVNKFSSRRQYPHGSTSHHHHDSDLSENMYGGQQQISRFEILSSLQKNQRFMQFENLPPLRLAPPAVYHEKVSKVAHYQTGESSNNSAVIDKHSRHKQNRDLRVRGSSIRFPLKSSFFGKEKTNKR 1926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03989 1926 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 467 503 - -
Mepo1g03989 1926 MobiDBLite consensus disorder prediction 1889 1904 - -
Mepo1g03989 1926 MobiDBLite consensus disorder prediction 1807 1826 - -
Mepo1g03989 1926 ProSiteProfiles Zinc finger RING-type profile. 1733 1781 IPR001841 -
Mepo1g03989 1926 ProSiteProfiles Trp-Asp (WD) repeats profile. 467 508 IPR001680 GO:0005515
Mepo1g03989 1926 MobiDBLite consensus disorder prediction 1 81 - -
Mepo1g03989 1926 Pfam Region in Clathrin and VPS 1450 1527 IPR000547 GO:0006886|GO:0016192
Mepo1g03989 1926 MobiDBLite consensus disorder prediction 31 70 - -
Mepo1g03989 1926 MobiDBLite consensus disorder prediction 1880 1906 - -
Mepo1g03989 1926 SUPERFAMILY WD40 repeat-like 456 755 IPR036322 GO:0005515
Mepo1g03989 1926 Pfam Golgi CORVET complex core vacuolar protein 8 949 1133 IPR025941 -
Mepo1g03989 1926 Coils Coil 328 348 - -
Mepo1g03989 1926 Pfam Anaphase-promoting complex subunit 4 WD40 domain 465 514 IPR024977 -
Mepo1g03989 1926 ProSitePatterns Trp-Asp (WD) repeats signature. 486 500 IPR019775 -
Mepo1g03989 1926 MobiDBLite consensus disorder prediction 290 315 - -
Mepo1g03989 1926 PANTHER VACUOLAR PROTEIN SORTING VPS41 331 1856 IPR045111 GO:0006623
Mepo1g03989 1926 MobiDBLite consensus disorder prediction 16 30 - -
Mepo1g03989 1926 Gene3D - 389 535 IPR015943 GO:0005515
Mepo1g03989 1926 SUPERFAMILY RING/U-box 1732 1786 - -
Mepo1g03989 1926 MobiDBLite consensus disorder prediction 289 324 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03989 K20178 - gmx:100780869 2620.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03989 1 46407712 46419312 Mepo1g03989 1 46407712 46419312 ECH