Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03988 ATGGCAACGGTGACTGCTTCAAGCAACATAGTATCTAGAATTTCTCATGTCTACCATGTCAATGTACCAACTATCTCATGTGAGTCTAAAACAGCACCAATGAAACTTGGTTCTATGAGAAAAGCCAATACACATAATGGACTTAGAATTTTGAACTCATTGGATGAGCTATTAAATAGAACTCCAATTAAAATGAAGGCAGTGAAATCAAGGAGAAAAGGTCTTCAGAGAAAGAATGTTATGCCGAAAGGTATCATAACTTGTGGCATGAATTTGATCTTTGTTGGAACTGAGGTTGGTCCATGGAGCAAAACTGGTGGTTTAGGAGATGTTCTTGGTGGTCTTCCACCAGTATTAGCAGCTAATGGACACAGAGTTATGACCATCTCTCCACGTTATGACCAATACAAAGATGCGTGGGATACAAGTGTAACAATTGAGGTAAAAGTAGGAGATAGAAATGAAAAAGTTCGCTTCTTTCATTGCTTTAAAAGAGGAGTTGATCGCGTCTTTGTAGATCACCCTATATTTCTTGAAAAGGTTTGGGGGAAAACTGGAACAAAAATTTATGGACCTACCACAGGAGATGATTACCAAGACAATCAACTACGTTTTAGCCTCTTCTGTCAGGCAGCTCTGGAAGCAGCAAGGGTTCTGAATCTCACAAGCAATAAATATTTCTCAGGACCATACGGTGAAGATGTCATTTTCGTCGCTAATGATTGGCACACGGCCCTTATCTCATGCTACTTGAAATCTACGTACCAGCCAAATGGCATATTTAGGAATGCCAAAGTTGTTTTTTGTATCCACAACATTGCTTACCAAGGCAGATTTGCATTCGCGGACTATTCACTTCTCAATCTCCCTGACCAATTTAAAAGCTCATTTGACTTCATTGATGGGTATGTTAAACCAGTTGTTGGAAGAAAAATCAATTGGATGAAAGCTGGAATTTTAGAATCTCACAGGGTTTTAACTGTTAGTCCATACTATGCTCAAGAACTAGTGTCAGGCCCAGATAAAGGAGTGGAACTGGACAACATTCTTCGCCGAACTGGTGTTACTGGTATTGTTAATGGCATGGATGTTCAAGAGTGGAATCCTTCCACCGACAAATACATAACTGTCAAATACGACGATTCGACGGTGTTGGAAGGGAAAGCTCTTCTGAAAGAAGCACTCCAAGCAGAAGTTGGATTGCCGGTTGACAAAAATATTCCTCTCATTGCTTTCATTGGTAGACTCGAAGAGCAAAAAGGTTCTGATATTCTTGTAGCAGCCATTCCCCAATTTATTAAGGAGGATGTTCAGATAGTAGCCCTAGGAACAGGAAAAAAGGAAATGGAAAAGCAACTTCAACAACTTGAAATATCATACCCTGACAAGGCTAGAGGAGTTGCGAAATTCAATGTTCCCTTAGCACACATGATAATTGCAGGAGCTGATTATATATTGATTCCTAGTAGATTTGAGCCTTGTGGTCTTATTCAGCTACAAGCTATGCGCTACGGAACTGTACCTATTGTTGCCTCAACAGGTGGATTAGTGGACACGGTCAAAGAAGGTTTCACTGGATTTCAGATGGGTTCTTTTAATGTTGAATGTGATGCTGTAGATCCTGCTGATGTGGATGCTCTAGCAAAGACTGTCACAAAGGCCCTTGCAGTCTACGGCACTCCAGCTTTTACAGAAATGATCAAGAATTGCATGGCTCAAGATCTTTCATGGAAGGGACCTGCTAAGAAGTGGGAGGAAGTGCTGCTAAGTTTGGGAGTTCCTGGCAGTGAACCTGGAATTGATGGAGAAGAAATTGCTCCACAGGCAAAGGAAAACGTTGCAACTCCATGA 1851 0.41 MATVTASSNIVSRISHVYHVNVPTISCESKTAPMKLGSMRKANTHNGLRILNSLDELLNRTPIKMKAVKSRRKGLQRKNVMPKGIITCGMNLIFVGTEVGPWSKTGGLGDVLGGLPPVLAANGHRVMTISPRYDQYKDAWDTSVTIEVKVGDRNEKVRFFHCFKRGVDRVFVDHPIFLEKVWGKTGTKIYGPTTGDDYQDNQLRFSLFCQAALEAARVLNLTSNKYFSGPYGEDVIFVANDWHTALISCYLKSTYQPNGIFRNAKVVFCIHNIAYQGRFAFADYSLLNLPDQFKSSFDFIDGYVKPVVGRKINWMKAGILESHRVLTVSPYYAQELVSGPDKGVELDNILRRTGVTGIVNGMDVQEWNPSTDKYITVKYDDSTVLEGKALLKEALQAEVGLPVDKNIPLIAFIGRLEEQKGSDILVAAIPQFIKEDVQIVALGTGKKEMEKQLQQLEISYPDKARGVAKFNVPLAHMIIAGADYILIPSRFEPCGLIQLQAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFNVECDAVDPADVDALAKTVTKALAVYGTPAFTEMIKNCMAQDLSWKGPAKKWEEVLLSLGVPGSEPGIDGEEIAPQAKENVATP 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03988 616 FunFam Starch synthase, chloroplastic/amyloplastic 91 367 - -
Mepo1g03988 616 Gene3D Glycogen Phosphorylase B; 363 573 - -
Mepo1g03988 616 NCBIfam glycogen/starch synthase, ADP-glucose type 90 589 IPR011835 GO:0004373
Mepo1g03988 616 Hamap Glycogen synthase [glgA]. 90 591 IPR011835 GO:0004373
Mepo1g03988 616 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 81 588 - -
Mepo1g03988 616 CDD GT5_Glycogen_synthase_DULL1-like 91 590 - -
Mepo1g03988 616 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 41 594 - -
Mepo1g03988 616 Pfam Glycosyl transferases group 1 404 529 IPR001296 GO:0016757
Mepo1g03988 616 Gene3D Glycogen Phosphorylase B; 92 582 - -
Mepo1g03988 616 Pfam Starch synthase catalytic domain 92 351 IPR013534 -
Mepo1g03988 616 MobiDBLite consensus disorder prediction 595 616 - -
Mepo1g03988 616 FunFam Starch synthase, chloroplastic/amyloplastic 368 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03988 Mepo-Chr1 46401056 46406456 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03988 1 616 Glycosyltransferase AT1G32900 71.197 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03988 K13679 - gmx:100817424 1029.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03988 1 46401056 46406456 Mepo1g03988 1 46401056 46406456 ECH