Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03938 ATGACAGAGTTAACAGTGAAAACTCCACCTCAAATGCAATCATTTGGTGTTTTCCTCCGTGAACCACCGCAGAATGAGGCCACCGACGATGATAACCACCGGAACCAATCACCCGCGATGAGGAAAACCATAAAGAAAACAATAATCATTGATGAATCTTCCTTAGAGAATCCTGATTTGGGTCCATTTCTTCTGAAGATGGCAAGAGATACCATAGCTTCTGGTGAGAATCCAGAAAAGGCTTTGGATTATGCAATTCGGGCATCCAAATGTTTTGAACGGGTTTCGGGTCCAGGTGTGGATCTTGCCACTTGTTTACATGTTGTTGCTGCAATTTATTGTAGTTTGGGGAATTTGGATGAGGCTATTGAGGAATTGGAACGGTCTATTTTGTTGTTGGATGTTGAAAACGGGTCGGGTCATGCTATGGTGAAGTTTTCTGGATATATGCAACTTGGTGATACTTATTCTATGACTGGATTGTTGGACAGATCCATCTTGTGTTATGAGTCGGGTTTGAAGATTCAAATGGATATTTTGGGTAAGTCCGACCCGAGAGTTGCTGAGACTTGCAGGTACTTAGCTGAAGCCCATGTTCAAGCCATGCAATTCGACGATGCAGAGCACTTCTGCAAGAAGACTCTGGAAATTCATAGGGAGCATTGCTCACCCGCTTCCCTTACTGAAGCAGCAGACCGACGCCTCATGGCCCTTATCTGTGAAGCAAAGGGAGATTATGAGCCAGCACTCGAGCATCTTGTCCTAGCCAGCATGGCAATGATTGCTAACGGACAAGATAACGAAGTTGCAGCTATTGATATTAGCATCGGAGATATTTACTCGTCGCTGTCTCGTTTCGACGAAGCTGTCTTCGCTTATCAGAAAGCACTGACAGCGTTCAAATCCACCAAGGGTGAAAATCATAGTTCTGTTGCTTTAGTGTACATTCGACTCGCAGATCTTTACTGCAAGACTGGAAAATTACGAGAGTCAGCGTCCTATTGCGAAAACGCGTTAAGAATATACAGTAAACCTATGCCTGGAATAACCGCCGGAGAGATTGCAAGTGGATTGACTGAAATCTCTGCCATCTACGAAGCTCTAAACGAGCCCGAGGAGGCGCTGAAGCTTTTGCAGAAGGCTGTGAAATTATTGGAGGGTATCCCAGGACAATATAGGACAGTGGCAGGAATTGAAGCTCAAATGGGAGTGATGTTCTACATGGTCGGTCGGCATGTGGATGCTTGGAAATCTTTTGATAATGCTGTCACCAAGCTGAGGGCCGGGGGGGAGAGGAAATCTGCGTTTTTTGGATTTGTGTTGAACCAGATGGGCTTGGCATGTGTTCAACTGTACAAAATTGAAGAGGCTGCCACACATTTTGAAGAAGCTAGAGAGGTACTGGAAAGGGAATGTGGAACCTATCATCTGGACACTCTTGGTGTGTACAGCAACCTAGCTGCAACTTATGATGCCCTGGGAAGAGTTGAAGATGCCATTCAGATATTGGAATACATACTCAAAATGAGAGAAGAAAAACTTGGAACCGCAAATCCAGATGTTGATGATGAAAAGAAAAGACTGTTTGAGCTTTTGAAAGAAGCTGGAAGAGTCCGAAGTAGAAAGGGAACATCTCTTGAAAACCTTATAGATTCAAACTCCTTAAAGATGAAGAAAGAAGCAAGAAGGAGACGAGGTGCATTTGGTTTTAGAACTTAA 1719 0.441 MTELTVKTPPQMQSFGVFLREPPQNEATDDDNHRNQSPAMRKTIKKTIIIDESSLENPDLGPFLLKMARDTIASGENPEKALDYAIRASKCFERVSGPGVDLATCLHVVAAIYCSLGNLDEAIEELERSILLLDVENGSGHAMVKFSGYMQLGDTYSMTGLLDRSILCYESGLKIQMDILGKSDPRVAETCRYLAEAHVQAMQFDDAEHFCKKTLEIHREHCSPASLTEAADRRLMALICEAKGDYEPALEHLVLASMAMIANGQDNEVAAIDISIGDIYSSLSRFDEAVFAYQKALTAFKSTKGENHSSVALVYIRLADLYCKTGKLRESASYCENALRIYSKPMPGITAGEIASGLTEISAIYEALNEPEEALKLLQKAVKLLEGIPGQYRTVAGIEAQMGVMFYMVGRHVDAWKSFDNAVTKLRAGGERKSAFFGFVLNQMGLACVQLYKIEEAATHFEEAREVLERECGTYHLDTLGVYSNLAATYDALGRVEDAIQILEYILKMREEKLGTANPDVDDEKKRLFELLKEAGRVRSRKGTSLENLIDSNSLKMKKEARRRRGAFGFRT 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03938 572 Gene3D Tetratricopeptide repeat domain 436 540 IPR011990 GO:0005515
Mepo1g03938 572 Gene3D Tetratricopeptide repeat domain 257 435 IPR011990 GO:0005515
Mepo1g03938 572 SMART tpr_5 188 221 IPR019734 GO:0005515
Mepo1g03938 572 SMART tpr_5 146 179 IPR019734 GO:0005515
Mepo1g03938 572 SMART tpr_5 270 303 IPR019734 GO:0005515
Mepo1g03938 572 SMART tpr_5 355 388 IPR019734 GO:0005515
Mepo1g03938 572 SMART tpr_5 480 513 IPR019734 GO:0005515
Mepo1g03938 572 SMART tpr_5 438 471 IPR019734 GO:0005515
Mepo1g03938 572 SMART tpr_5 312 345 IPR019734 GO:0005515
Mepo1g03938 572 SMART tpr_5 103 136 IPR019734 GO:0005515
Mepo1g03938 572 Pfam MalT-like TPR region 107 256 IPR041617 -
Mepo1g03938 572 SUPERFAMILY TPR-like 103 516 IPR011990 GO:0005515
Mepo1g03938 572 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 27 554 - -
Mepo1g03938 572 Coils Coil 116 136 - -
Mepo1g03938 572 Gene3D Tetratricopeptide repeat domain 64 256 IPR011990 GO:0005515
Mepo1g03938 572 ProSiteProfiles TPR repeat profile. 270 303 IPR019734 GO:0005515
Mepo1g03938 572 MobiDBLite consensus disorder prediction 22 41 - -
Mepo1g03938 572 MobiDBLite consensus disorder prediction 24 38 - -
Mepo1g03938 572 Pfam Tetratricopeptide repeat 441 512 - -
Mepo1g03938 572 Pfam Tetratricopeptide repeat 269 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03938 Mepo-Chr1 45715914 45719754 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03938 - - cam:101489796 999.579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03938 1 45715914 45719754 Mepo1g03938 1 45715914 45719754 ECH