Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03882 ATGAAGGATATAACTGGGAAATTTGACATGGAAAAAGTGATAGAAGAATTTGAGAGGCTAACAAAGGATGCTGAGAATGTTCAAAAAGAAACACTGAAAAAGATTTTGAAAGTTAATGCATCAGCTGAATACTTGCAGAGTTTAGGACTCAATGGAAGAACTGATCCTGAAAGCTTCAAGGCTTGCGTTCCATTAGTCACTTACAAAGATTTGGAGCCTTATATCAATAGAATAATTGATGGTGATTTTTCTCCTATTCTCACTGGAAAACCTATCACTGATATTTCCTTAAGTTCTGGTACTAGTCAAGGGAAGCAAAAATATATACCATGGAATGATGAATTGTTTGAAACTACAGTGCAGATATATCAAACCTCTTTTGCCTTTAGGAACAAAGAGTTTCCTATTCAAAATGGCAAGGCCTTAAGCTTCATCTACAGCAGCAAATTATCGCAAACAAAAGGGGGTGTGACAGCAGGAACAGCCACAGCAAATGTGTTCAGAAATCCAGGATACAAGCATACCATGCAGGCACTTAAATCCCCTAGTGTCAGTCCAGATGATGTGATATTTAGTCCAGATTTTCACCAATCACTCTACTGTCACCTCTTATGTGGACTACTTTTCAGAGAAGAAGAATTTTGGGTTAGAAATGAAGAACTTAATATGTATGAGAAGAGACTTGATGATGCTAGTTATATTCATTTTAAGGTTGGAAGGACTAACAATCGTGGTGATGGATGCGTTCCAAACAGAGAGACAAAGAATACTTCTTGTAGATATGCGCTTATGGCTGCTGCAAGTTCAGGGGAGATGAACTCTTCTGGAGGGCTGGTTAGAGATTCACTGTAG 852 0.3815 MKDITGKFDMEKVIEEFERLTKDAENVQKETLKKILKVNASAEYLQSLGLNGRTDPESFKACVPLVTYKDLEPYINRIIDGDFSPILTGKPITDISLSSGTSQGKQKYIPWNDELFETTVQIYQTSFAFRNKEFPIQNGKALSFIYSSKLSQTKGGVTAGTATANVFRNPGYKHTMQALKSPSVSPDDVIFSPDFHQSLYCHLLCGLLFREEEFWVRNEELNMYEKRLDDASYIHFKVGRTNNRGDGCVPNRETKNTSCRYALMAAASSGEMNSSGGLVRDSL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03882 283 Coils Coil 10 30 - -
Mepo1g03882 283 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 212 IPR004993 -
Mepo1g03882 283 Pfam GH3 auxin-responsive promoter 16 216 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03882 Mepo-Chr1 45136135 45143113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03882 9 212 EF-hand Containing Proteins AT1G23160 38.049 2.06e-39 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03882 K14506 - gmx:100813492 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03882 1 45136135 45143113 Mepo1g03882 1 45136135 45143113 ECH
Mepo3g04193 3 50988239 50994064 Mepo1g03882 1 45136135 45143113 PCT