LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo1g03867	ATGTTGCAAATTTCATGCAATTATTTACATGCAAAATTCAAACCATATAATAACCTCATCACTATCACACTCACTTTCTCACCCCACCATTCCAATTTCTCACCCCCACAACAAACCACCATAATCCGCCGATCAATGCCGACCGGCGAACTTCACTACACCACCCCACCAAAGGTGTCAGCCACCACCAACAACTCCGCCGTCGTTGGTGCCTCCGACGAAGGCTGGCTATGGTCACAAATCAAAGCGGAAGCACGCCGCGACGCGGAATCGGAACCAGCCCTAGCAAGCTACCTCTACTCAACGATTCTTTCGCACTCTTCTCTTGAACGTTCACTTTCGTTTCATCTTGGTAACAAGCTTTGTTCTTCGACGCTTCTTTCGACGCTTCTTTATGACCTTTTTCTTAACGCTTTTGCGACTGATCCGTCGCTAAGTTCTGCTGCTGTTGCTGACCTTCGTGCTGCTCGTGAACGTGATCCTGCTTGTATCTCTTACTCTCACTGTTTGCTTAATTACAAGGGATTTCTTGCTTGTCAGGCGCACCGTGTGGCGCACCTGTTATGGAGGCAGGCTCGGCAGCCGTTAGCACTAGCACTACATTCTCGCGTCGCTGATGTATTTGCGGTGGATATTCACCCGGCAGCGAGGATTGGCAAAGGGGTTTTGTTTGACCACGCCACAGGGGTAGTGGTGGGTGAGACGGCGGTGATTGGAAATAATGTGTCGATCCTGCACCATGTAACACTGGGTGGGACTGGAAAGGTTGGTGGGGATCGGCATCCCAAGATTGGAGATGGGGTGCTCATTGGTGCTGGTGCTACCATTCTGGGTAATATTAAGATTGGGGAAGGCGCTAAGATTGGTGCTGGGTCTGTTGTTTTGATTGATGTGCCGCCACGGACCACTGCGGTCGGTAACCCGGCGAGATTGGTTGGTGGTAAGGAGAAGCCGTCTCAGCTTGAGGATGTGCCCGGGGAGTCCATGGACCATACTTCCTTTATCTCTGAGTGGTCTGATTATATCATTTAA	1032	0.5048	MLQISCNYLHAKFKPYNNLITITLTFSPHHSNFSPPQQTTIIRRSMPTGELHYTTPPKVSATTNNSAVVGASDEGWLWSQIKAEARRDAESEPALASYLYSTILSHSSLERSLSFHLGNKLCSSTLLSTLLYDLFLNAFATDPSLSSAAVADLRAARERDPACISYSHCLLNYKGFLACQAHRVAHLLWRQARQPLALALHSRVADVFAVDIHPAARIGKGVLFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIGDGVLIGAGATILGNIKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKEKPSQLEDVPGESMDHTSFISEWSDYII	343

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo1g03867	343	Gene3D	Hexapeptide repeat proteins	211	331	-	-
	Mepo1g03867	343	MobiDBLite	consensus disorder prediction	307	328	-	-
	Mepo1g03867	343	Pfam	Hexapeptide repeat of succinyl-transferase	228	244	IPR001451	-
	Mepo1g03867	343	Pfam	Bacterial transferase hexapeptide (six repeats)	261	294	IPR001451	-
	Mepo1g03867	343	PANTHER	SERINE ACETYLTRANSFERASE	63	343	-	-
	Mepo1g03867	343	ProSitePatterns	Hexapeptide-repeat containing-transferases signature.	270	298	IPR018357	GO:0016740
	Mepo1g03867	343	NCBIfam	serine O-acetyltransferase	151	310	IPR005881	GO:0005737\|GO:0006535\|GO:0009001
	Mepo1g03867	343	Pfam	Serine acetyltransferase, N-terminal	77	181	IPR010493	GO:0005737\|GO:0006535\|GO:0009001
	Mepo1g03867	343	CDD	LbH_SAT	208	308	IPR045304	-
	Mepo1g03867	343	SMART	SATase_N_2_a	77	181	IPR010493	GO:0005737\|GO:0006535\|GO:0009001
	Mepo1g03867	343	SUPERFAMILY	Trimeric LpxA-like enzymes	76	313	IPR011004	-
	Mepo1g03867	343	FunFam	Serine acetyltransferase	211	336	-	-
	Mepo1g03867	343	Gene3D	serine acetyltransferase, domain 1	59	210	IPR042122	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo1g03867	Mepo-Chr1	44989685	44992464	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo1g03867	77	333	Miscellaneous Gene Families	AT2G17640	55.253	4.10e-90	271

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo1g03867	K00640		-	gmx:547632	510.375