Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03768 ATGTCAGAAACTGACATGGCAGTTATTAAACCCGAGATGATGAAGCCTTATGTGTGGCTTCAAACTTCCGATGAATCAATCCAACAAGTGGAACAAGAGATTGCGATGTTTTGTCCATTTATATGTCAAGAAATATTACAAAAAGGCAATGGAACTTCCAAGAATTGTGCAGTATGTCTTCCTCAGCAAGTCAGTCCTGCAATGTTGAGCTTAATTCTTGATTACTGTCGATTTCATCAAGTACTAGGCCGCTCAAACAAGGAACGGAAGGCTTATGATGAGAAATTCGTTAGGATAGACACAGAGAAGCTCTGTGAGTTGACGTCTGCTGCAGACAGCCTTCAGTTAAAGCCATTGGTTGATCTCACCAGTCGTGCTCTTGCTCGAATAATTGAAGGAAGATCACCGGAGGAGATACGCGATATATTTCATTTGCCTGATGATCTTACAGAGGAAGAGAAGTTGGAGCCCTTGAGAAACATAACTGATGATCCAAGGATAAGGCTTTTAAACCGCTTGTATGCCAAGAAGAGGAAAGAGCTTAAAGAGCGTGAGAGGATAAAGAATGTTGAGGCTGAAGAAGAGCATGTAGACGAACGTTCAGTTGATGACCTTTTGTCTTTTATTAATGGAAATGATGGAGATCCGAAGGGGATTAAAACTTCCAAGAATAAAAAGAAGAACCGAAGGAAAAAAGACCAACAGAAGAATTCTTCTTTGAAGGAATCATCTGTACCACATAAGAAGGAGGTAAATGGTCATAATATCAGACATCAAAGTTCAGAAGCTGATAGACCGTGTGAGACCTCAAGTTTCCACCATATAGACGATGATCCTATGGTTGAGTTCGATGATGATGACTATGATATAGATGATGATATAGATGATCCGGTATTAAAAGCAAAAATTGACAGGGAAGTGGAAGATTTTGCCCGCAGATTAAATTCTGACTGGCCAGAGAGAATAAAAGACTTTTTGTCATCCTCACAGGAAAGGAAGACGATGCTTTTTACTACCAATGGGAATGGCTTTCTAGGGCGACATACTTGA 1050 0.4019 MSETDMAVIKPEMMKPYVWLQTSDESIQQVEQEIAMFCPFICQEILQKGNGTSKNCAVCLPQQVSPAMLSLILDYCRFHQVLGRSNKERKAYDEKFVRIDTEKLCELTSAADSLQLKPLVDLTSRALARIIEGRSPEEIRDIFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYAKKRKELKERERIKNVEAEEEHVDERSVDDLLSFINGNDGDPKGIKTSKNKKKNRRKKDQQKNSSLKESSVPHKKEVNGHNIRHQSSEADRPCETSSFHHIDDDPMVEFDDDDYDIDDDIDDPVLKAKIDREVEDFARRLNSDWPERIKDFLSSSQERKTMLFTTNGNGFLGRHT 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03768 349 PANTHER SKP1 14 155 IPR016897 GO:0006511
Mepo1g03768 349 SMART skp1_3 15 116 IPR001232 GO:0006511
Mepo1g03768 349 Gene3D Potassium Channel Kv1.1; Chain A 12 161 IPR011333 -
Mepo1g03768 349 SUPERFAMILY Skp1 dimerisation domain-like 91 159 IPR036296 GO:0006511
Mepo1g03768 349 FunFam SKP1-like protein 21 isoform X1 12 162 - -
Mepo1g03768 349 MobiDBLite consensus disorder prediction 235 279 - -
Mepo1g03768 349 MobiDBLite consensus disorder prediction 207 281 - -
Mepo1g03768 349 Coils Coil 175 195 - -
Mepo1g03768 349 Pfam Skp1 family, dimerisation domain 117 154 IPR016072 GO:0006511
Mepo1g03768 349 SUPERFAMILY POZ domain 16 80 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03768 Mepo-Chr1 43844695 43852855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03768 - - gmx:100794666 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03768 1 43844695 43852855 Mepo1g03768 1 43844695 43852855 ECH
Mepo1g03768 1 43844695 43852855 Mepo3g02148 3 31044599 31051483 ECH
Mepo3g02148 3 31044599 31051483 Mepo1g03768 1 43844695 43852855 PCT