Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03748 ATGGAGCATTTAGATGACGGGGAAGTGTCAGAAGATAATGTTGATGAAGTAGAAGTCACTAATAATACTCCACTGATTTATGGCCTTCCAGATGATATTTCTCTTTTGTGTCTGGCAAGAGTTCCTAGAAAATATCATTCGGTTTTGAAGGCTGTCTCGAAAAGATGGAGGGACTTAGTTTGCAGCGAAGAGTGGCTTTATTATCGTAGAAAGCATAAACTTGATGAGACATGGATCTATGCTTTGTGCAGGGATAAATTGGATCATGTTTGCTGTTATGTTTTGGATCCTACCTCGTCAAGAAAATCCTGGAAGCTCATTCATGGGGTTCCACCTCACGTAATGAAAAGGAAAGGAATGGGTTTTGAAGCTTTGGGAAATAAACTCTTCTTATTGGGTGGCTGTGGCTGGTCTGAAGATGCTACTGACGAAGTTTATTCATATAATGCTTCTTTGAACTCGTGGGTTGAAGCTGCTTCCTTGTCAACTGCTAGGTGCTACTTTGCTTGTGAAGCAATGGATGAAAAACTGTATGCTATTGGTGGCATAGGTTCAAATTCAAGTGATCCTCATTCTTGGGATATTTTTGATCCTTGCACAAATGGTTGGACATCTCACAGAGATCCTAATATAGTTCCTGAAATTGAAGATTCAATAGTTATGGACGGTAAAATATACATCCGATGTGGTAAATCTCCTTTAACACCTCATGTGTATGCCGTTGTATACGATCCATCAAATGGCACATGGCAGCATGCAGATACCGACATGGTTTCAGGATGGAGAGGTCCTGCAGTTGTTGTCAACGGAATCCCTTTTGTTTTGGATCAGAGTTCGGGTACTAGGTTGACGATGTGGCATAAAGAGAGACGCGAGTGGATACTTGTCGGTAAGTTGTCACCGTTGCTTACAAGACCACCCTGCCAACTTGTTGCAGTTGGTAAAAGCATTTATATTATTGGAAAAGGGCTTAGCACTGTGGTTGTTGATGTTGGTGATATTGGGAATATGGGAAGGGCGATAGCGGGTTCTTCTATACCCAAATTAGTCCCTGATTACAATGTAATTAGTTGTAAATGCTTGTCAATCTGA 1092 0.4112 MEHLDDGEVSEDNVDEVEVTNNTPLIYGLPDDISLLCLARVPRKYHSVLKAVSKRWRDLVCSEEWLYYRRKHKLDETWIYALCRDKLDHVCCYVLDPTSSRKSWKLIHGVPPHVMKRKGMGFEALGNKLFLLGGCGWSEDATDEVYSYNASLNSWVEAASLSTARCYFACEAMDEKLYAIGGIGSNSSDPHSWDIFDPCTNGWTSHRDPNIVPEIEDSIVMDGKIYIRCGKSPLTPHVYAVVYDPSNGTWQHADTDMVSGWRGPAVVVNGIPFVLDQSSGTRLTMWHKERREWILVGKLSPLLTRPPCQLVAVGKSIYIIGKGLSTVVVDVGDIGNMGRAIAGSSIPKLVPDYNVISCKCLSI 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03748 363 SMART fbox_2 29 69 IPR001810 GO:0005515
Mepo1g03748 363 Pfam Kelch motif 117 162 IPR006652 GO:0005515
Mepo1g03748 363 Pfam Kelch motif 164 204 IPR006652 GO:0005515
Mepo1g03748 363 Pfam F-box domain 28 62 IPR001810 GO:0005515
Mepo1g03748 363 CDD F-box_AtAFR-like 25 69 - -
Mepo1g03748 363 SMART kelc_smart 128 175 IPR006652 GO:0005515
Mepo1g03748 363 Gene3D - 70 335 IPR015915 GO:0005515
Mepo1g03748 363 SUPERFAMILY Kelch motif 89 324 IPR015915 GO:0005515
Mepo1g03748 363 SUPERFAMILY F-box domain 24 105 IPR036047 GO:0005515
Mepo1g03748 363 PANTHER OS02G0202900 PROTEIN 19 336 IPR045887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03748 Mepo-Chr1 43669866 43673105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03748 29 304 Miscellaneous Gene Families AT4G33900 26.102 1.40e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03748 - - gmx:100798211 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03748 1 43669866 43673105 Mepo1g03748 1 43669866 43673105 ECH