Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03613 ATGGCGGACAACACCATCACCTCCCCACTCCTCCCATCCGACCACTTAATCCTAACAATCAACTCCTCTTCCTCCGACACCGACTCCTCCGTCTCCTCTGACACACGTCAAATCTCCAACCCATTCAACGTTGGAGAGTTGACCGTGCCAGAGGCGATAGCTGTGGACCCATTCCACAACTATAAAGCAGGGATTAATGGGTTTTACGAATGGGTGAAAACGTTTTTGTGTATTCCTTTAGCTTTGGTGAGATTGGTGATATTTGGTTTGTGTTTGGCGATTGGTTATGTGGCTACTAAGGTTGCTCTTTATCGTTGGAAAGATAAGGAGAATCCTATGCCTAGGTGGAGATGTAGGATTATGTGGGTCACCAGAATTTCTGCTAGATTCATTCTCTTTTCTTTTGGCTATCATTGGATAAAACGGAAGGGAAAACCTGCCCGAAGAGAAGTTGCTCCAATAATTGTATCTAATCATGTATCATATATTGAGCCTATCTTCTATTTCTATGAATTATTTCCCACCATCGTGGCATCTGAGTCTCATGACTCCATACCTTTTGTTGGCACAATCATTAGAGCAATGCAGGTCATATATGTTAACAGGTTCTCGCAATCATCAAGGAAGCAGGCTGTTAGAGAAATAAAGAGAAGGGCTTCTTGCGATAGATTTCCTCGAGTACTTTTATTTCCCGAGGGAACGACGACTAACGGCCGGAACCTTATTTCCTTCCAACTCGGAGCATTCATCCCTGGGTACCCAATCCAGCCTATAATTGTACGCTATCCTCATGTGCACTTTGATCAATCTTGGGGCAATGTTTCTTTGGGACAGCTTATGTTCAGGATGTTTACTCAATTTCACAACTTCTTCGAGGTTGAATATCTTCCTGTCATTTCACCCCTGGATGATAAGGAAACCGCTGTGCATTTTCGTAAAAGGGCTAGCCATGCTATTGCAAGTGCATTGAATACTGTCCAAACTGGACATTCTTATGGAGATATAATGCTTCATATCAAAGCACAAGAAGCAAAACATGAGAACCCCTCGAGTTTTATGGTTGAAATGGCCAAGGTGGAATCATTATTTCATATCAGCAGCTTGGAAGCTGTGGACTTTTTGGACAAATTCTTGGCTATGAATCCCGATCCCAGTGGTCGTGTTCAATATCGTGGCTTTTTGAGAGGTTTAAGACTGAAGGCTTGTCCACTTTCTGAAAAGATATTTTCATTCATTGATGTGGAGAAGTATGGGAAAATTACATTCAGACAGTTCTTGTATGGATCTGCACATGTCATGAAGCATCCAGGGTTCAATCAAACTTGTGAAGCAGCCTTTGCTGAGTGTGGCGGTTCTGTAAAGGGCTACATTGTGGAAGACGAATTACGAGATTACATTCAATCTGCTATCCCCAGCTGGAATGAGGACGAGGTCCATGATCTTTTTACGTTATTTGATGATGATAATGATGGGAGAATTTACAAGGATGAATTTCTTTCATGCTTGAGAAGAAATCCTCTTCTCACAGCCCTTTTTACGCCTCAACCGCGGCACAAGGAATCATGTGGTAATGGAGTGGTAGAGATACTGTGA 1593 0.4262 MADNTITSPLLPSDHLILTINSSSSDTDSSVSSDTRQISNPFNVGELTVPEAIAVDPFHNYKAGINGFYEWVKTFLCIPLALVRLVIFGLCLAIGYVATKVALYRWKDKENPMPRWRCRIMWVTRISARFILFSFGYHWIKRKGKPARREVAPIIVSNHVSYIEPIFYFYELFPTIVASESHDSIPFVGTIIRAMQVIYVNRFSQSSRKQAVREIKRRASCDRFPRVLLFPEGTTTNGRNLISFQLGAFIPGYPIQPIIVRYPHVHFDQSWGNVSLGQLMFRMFTQFHNFFEVEYLPVISPLDDKETAVHFRKRASHAIASALNTVQTGHSYGDIMLHIKAQEAKHENPSSFMVEMAKVESLFHISSLEAVDFLDKFLAMNPDPSGRVQYRGFLRGLRLKACPLSEKIFSFIDVEKYGKITFRQFLYGSAHVMKHPGFNQTCEAAFAECGGSVKGYIVEDELRDYIQSAIPSWNEDEVHDLFTLFDDDNDGRIYKDEFLSCLRRNPLLTALFTPQPRHKESCGNGVVEIL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03613 530 CDD EFh 455 499 IPR002048 GO:0005509
Mepo1g03613 530 CDD LPLAT_LPCAT1-like 128 336 IPR045252 GO:0008374
Mepo1g03613 530 SUPERFAMILY EF-hand 359 514 IPR011992 -
Mepo1g03613 530 Pfam Acyltransferase 152 257 IPR002123 GO:0016746
Mepo1g03613 530 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 115 324 - -
Mepo1g03613 530 SMART plsc_2 153 263 IPR002123 GO:0016746
Mepo1g03613 530 Pfam EF-hand domain pair 454 504 IPR002048 GO:0005509
Mepo1g03613 530 ProSiteProfiles EF-hand calcium-binding domain profile. 473 508 IPR002048 GO:0005509
Mepo1g03613 530 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 52 355 - -
Mepo1g03613 530 Gene3D - 352 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03613 Mepo-Chr1 42035053 42045350 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03613 113 306 Acyl Lipid Metabolism Gene Families AT1G80950 32.143 1.89e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03613 K13510 - gmx:100818109 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03613 1 42035053 42045350 Mepo1g03613 1 42035053 42045350 ECH