Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03602 ATGGCCAAAGACCTTCCAAAAGTCCTTGTTCTTGGTCCACCAACATGCTTCTCCACCTTCGAACAACTCTACTCTCACAAATTCAATTTCCTAAACCTCAAACCCTCAGGCCTATCACTACAACAATTCATCCTTGCCAACAACCATAACCCATCAACAATTCCCGCCATATTCTGTAGCGCTACATATTCCATCACTACCGATGTTCTCAACCTTCTTCCCTCGCTTAGCCTCGTCGTCACCTCCAGTGTTGGAACTGATCACATTGACCTTCATGAGTGCCTTCATCGTGGAATTCAGGTTGCTGGTGCTGGAGGAGTTTTCTCGGAGGATGTTGCTGATATGGCGGTGGCGTTACTGATTGCTGTCATCAGGAAAGTGACAGTGGCGGATCGGTATGTGAGGATGCGGCGGGAACGTTCTGATCCTTGGGATTTCCCTCTTGGATACAAGTTATCTGGCAAGCGAGTTGGAATTGTTGGATTGGGAAGTATTGGCATGGAAGTAGCCAAGCGACTCGAGTCATTTGATTGCATTATCTCATACCACTCTAAGCATCAAAAGACATCAATTTCGTACCCTTTCTATTCCAATGTTATAGATCTTGCAACTTCTAGCGATGCACTTGTGGTATGTTGTGCACTAAACAACCAAACACGACACATAGTAAACAAAGATGTCCTTTTGGCATTAGGAAAAGAAGGGTTTATTGTAAATGTTGGAAGAGGTGGTCTTATTGATGAGAAACAATTGATCAAGTGTTTGATTGAAGGAGAAATTGGTGGTGCTGGTTTGGATGTGTTTGAGAATGAGCCTCATGTTGATGAAAAGCTCTTTGCAATGGATAATGTGGTTTTATCTCCACATTCTGCAGCTTTTACTGTTGAATCTACAATGAGTTTGTGTGAACTTGTGGCAGGGAATTTAGAAGCTTTCTTCTTAAACAAGCCACTAATTAGTCCAGTGAAGTTGGTTGAGTAA 981 0.4292 MAKDLPKVLVLGPPTCFSTFEQLYSHKFNFLNLKPSGLSLQQFILANNHNPSTIPAIFCSATYSITTDVLNLLPSLSLVVTSSVGTDHIDLHECLHRGIQVAGAGGVFSEDVADMAVALLIAVIRKVTVADRYVRMRRERSDPWDFPLGYKLSGKRVGIVGLGSIGMEVAKRLESFDCIISYHSKHQKTSISYPFYSNVIDLATSSDALVVCCALNNQTRHIVNKDVLLALGKEGFIVNVGRGGLIDEKQLIKCLIEGEIGGAGLDVFENEPHVDEKLFAMDNVVLSPHSAAFTVESTMSLCELVAGNLEAFFLNKPLISPVKLVE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03602 326 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 56 322 IPR006139 GO:0016616|GO:0051287
Mepo1g03602 326 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 117 291 IPR006140 GO:0051287
Mepo1g03602 326 Gene3D - 109 294 - -
Mepo1g03602 326 CDD HPPR 6 313 - -
Mepo1g03602 326 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 157 184 IPR029752 -
Mepo1g03602 326 Gene3D - 51 317 - -
Mepo1g03602 326 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 5 319 - -
Mepo1g03602 326 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 50 135 - -
Mepo1g03602 326 FunFam Putative 2-hydroxyacid dehydrogenase 109 294 - -
Mepo1g03602 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 109 292 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03602 Mepo-Chr1 41875635 41877326 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03602 K15919 - gmx:100776772 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03602 1 41875635 41877326 Mepo1g03602 1 41875635 41877326 ECH