Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02805 ATGTTGGAAGGTCGTTCCTGCTTGGTTCCGAGGTTGTTTTCTAGTTCTTGTCAGGCACAGGCAGAGAACAATTGGTCTTTCATGAAATTCATGCCGGATTTGGAAATTAAAAACGGTAAACGAGGTATTGATGATGAAGACGAACCGCAGCCGAGGAAGGTTAACAGGAGATTGGAATCTTGTTATCAAGGTGAGATGGATTCTGTTGTTCCACAAATTGATCTGGATGATGATCAGAGGAAGGATTTTGAGCCATTGAATGATTGCCAAAGTGTGGAAAATGTTGTTGCTTTTTCTGTCCTGTTTTTGGCTGAAAAATCGCAGCATTCGTTCGGTGATGAACTGCAGAAGAAGCAGCTTGATGATGGGAATTTGAATAATTCCACTGACGAGCCGACGGATGAACAAAAGGAGCATCATGCAGGGGATTCATCAGATTCAAGTTCACTTTTGCCGCGCATGAATCGGGACAGCTCGATTACCTGTCTAAGCCGATGTTCGAGGTCCGATTACGGTTCACTTGCCTCGCTGAATCAGAGCTTCCGCAACATAATCCGGAGCGGTGAGCTCTATCGTTGGAGGAGACTGAACGGTATTATAGAGCACTGGGTTTATTTTTCCTGTGCCCTCCTCGAATGGGAGGCCTATGATCCAATTCGCGAACGGTGGATGCATTTACCTAGAATGGCTTCTAACGAATGCTTCATGTGTTCGGATAAGGAGTCTTTAGCGGTAGGTACCGAACTTCTTGTGTTCGGGAGGGAGTTGCAATCCCATGTTATATACAGATACAGTCTTTTGACAAACTCGTGGGAATCTGGAATGAGGATGAATTTTCCAAGATGCTTGTTTGGTTCTGCTAGCCTCAGAGAGATTGCAATTCTAGCTGGTGGTTGTGATTCAGATGGGCATATCCTTGACTCGGCCGAGCTCTATAACTCCGAGAATCAAACATGGGAAACACTCCCAAACATGATCAAGCCCAGGAAGATGTGCTCTGGGGTATTCATGGATGGAAATTTTTATGTTATCGGGGGAATTGGTGGACGCGATTCCAAGCTCCTTACGTGCGGTGAGGAATACAATCTACAAACTAGAACATGGAAAGAAATTCCTAACATGTCACCCGGGCGTAGTGCTAGGGGATCGGAGATGCCTGCCACAGCCGAGGCACCACCTCTAGTAGCTGTTGTAAATAATGAACTATACGCCGCTGATTATGCTGACATGGAGGTTAAAAAGTACGATAAAGGTAACAAAGTGTGGCTTACAATTGGTAGATTACCGGAGAGAGCGGCGTCGATGAACGGTTGGGGTCTAGCATTTAGGGCATGTGGAGATAGGCTTATTGTTATTGGCGGACCAAGGAGTCATGGTGAGGGTTTTATCGAACTCAATTCATGGGTTCCTAGTGAAGGACCTCCACAATGGAATCTACTTGCTCGAAAACAATCCGGTAACTTTGTTTATAATTGCGCCGTGATGGGATGCTGA 1494 0.4565 MLEGRSCLVPRLFSSSCQAQAENNWSFMKFMPDLEIKNGKRGIDDEDEPQPRKVNRRLESCYQGEMDSVVPQIDLDDDQRKDFEPLNDCQSVENVVAFSVLFLAEKSQHSFGDELQKKQLDDGNLNNSTDEPTDEQKEHHAGDSSDSSSLLPRMNRDSSITCLSRCSRSDYGSLASLNQSFRNIIRSGELYRWRRLNGIIEHWVYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFGRELQSHVIYRYSLLTNSWESGMRMNFPRCLFGSASLREIAILAGGCDSDGHILDSAELYNSENQTWETLPNMIKPRKMCSGVFMDGNFYVIGGIGGRDSKLLTCGEEYNLQTRTWKEIPNMSPGRSARGSEMPATAEAPPLVAVVNNELYAADYADMEVKKYDKGNKVWLTIGRLPERAASMNGWGLAFRACGDRLIVIGGPRSHGEGFIELNSWVPSEGPPQWNLLARKQSGNFVYNCAVMGC 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02805 497 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 141 497 - -
Mepo1g02805 497 Pfam Kelch motif 280 325 IPR006652 GO:0005515
Mepo1g02805 497 Pfam Kelch motif 328 375 IPR006652 GO:0005515
Mepo1g02805 497 SUPERFAMILY Kelch motif 210 494 IPR015915 GO:0005515
Mepo1g02805 497 Gene3D - 197 486 IPR015915 GO:0005515
Mepo1g02805 497 MobiDBLite consensus disorder prediction 113 153 - -
Mepo1g02805 497 FunFam F-box/kelch-repeat protein SKIP11 196 482 - -
Mepo1g02805 497 SMART kelc_smart 248 291 IPR006652 GO:0005515
Mepo1g02805 497 SMART kelc_smart 292 339 IPR006652 GO:0005515
Mepo1g02805 497 SMART kelc_smart 340 388 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02805 Mepo-Chr1 29875467 29878215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02805 157 373 EF-hand Containing Proteins AT4G39560 25.806 4.06e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02805 - - gmx:100791897 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02805 1 29875467 29878215 Mepo1g02805 1 29875467 29878215 ECH