LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo1g02632	ATGATGATGAATTGGATGAGCATGGCGACGAACGCATTAACAAACTCCTCCACAACATTTCTTCTTCACAAAACCATTATCCCCTTTTCTCTCACTAAAACCTCGCCGTTTCTTATTTCTTTTACCACTCCCTCTCGTAGCTTCCTTTCTGCTTCATCTCTTCCTTCTCTCTCCGCTGACCACACCTTCAACTTATCTGATTCTGGAGATGGAAATAATGTTGCAGTTTCCACGAGAGGTTCAAAAGTGCTTCTTAAAGGGATGACTTACTCTGAACTTGAAAAATGGGTTCAATCACATGGATACAGGCCAGGCCAGGCCATGATGTTATGGAAACGTATGTATGGAAACAACATTTGGGCACATCATACTGACGAGTTGGAAGGTTTGAACAAAGATTTCAAGCAGATGTTGAGTGAACATGCAGATTTCAAGGCACTTGCTGTGAAAGAAATTCACGCAGCGTCTGATGGCACTAGGAAGATTTTATTCACATTGGATGATGGGCTGGTCATAGAAACAGTTGTCATACCTTGTGTTACAGGCAGGACTACTGTGTGTGTTTCCAGTCAAGTTGGATGTGCCATGAATTGTCAATTTTGCTATACAGGAAGAATGGGTCTCAAGAGACATCTTACTGCCGCAGAAATAGTCGAGCAGGCTGTTTTTGCAAGACGGCTATTCACGAGTGAAATTGGTTCCATCACCAATGTTGTATTTATGGGCATGGGGGAACCTCTTCATAACATTGATAATGTCATTAAAGCTGCAGATATTATGGTGCATGACCAAGGGCTTCATTTCAGCCCCCGCAAGGTCACTGTTTCAACCAGTGGGCTTGTTCCGCAGCTCAGACGTTTCCTTCATGAATCCAACTGTACACTAGCTGTTAGTTTGAATGCAACTACTGATGAGGTAAGAAACTGGATCATGCCTATAAATCGAAAGTATAAACTGGACTTGCTTCTTGAGACACTTCGTGAGGAGCTTTCCTTCAAACGCAAATATAAGGTTCTATTTGAGTATGTGATGCTTGAAGGAATAAATGACAGCAATGAAGATGCAAAGAGGCTAATCACGCTTGTAAAGGGCATCCCTTGCAAGATCAATCTAATCTCATTCAATCCGCATAGTGGGTCCTTCTTCAGACCAACGAAAGAGGAAAGGATGATTGAATTCCGAAATATGCTAGCTGAGGCAGGATGTGTAGTACTTTTAAGACCGAGTAGAGGCGATGATCAGATGGCTGCATGTGGTCAGTTAGGCAAGCCCGGCACCCTTCAAGCTCCAATGCTACGTGTACCTCAGCAATTCCAAATGGCGGTTGGAAGTTCAACGTGTTCTTTATAA	1350	0.4304	MMMNWMSMATNALTNSSTTFLLHKTIIPFSLTKTSPFLISFTTPSRSFLSASSLPSLSADHTFNLSDSGDGNNVAVSTRGSKVLLKGMTYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKQMLSEHADFKALAVKEIHAASDGTRKILFTLDDGLVIETVVIPCVTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLFTSEIGSITNVVFMGMGEPLHNIDNVIKAADIMVHDQGLHFSPRKVTVSTSGLVPQLRRFLHESNCTLAVSLNATTDEVRNWIMPINRKYKLDLLLETLREELSFKRKYKVLFEYVMLEGINDSNEDAKRLITLVKGIPCKINLISFNPHSGSFFRPTKEERMIEFRNMLAEAGCVVLLRPSRGDDQMAACGQLGKPGTLQAPMLRVPQQFQMAVGSSTCSL	449

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo1g02632	449	Gene3D	-	82	144	-	-
	Mepo1g02632	449	FunFam	Radical SAM superfamily protein	82	145	-	-
	Mepo1g02632	449	ProSiteProfiles	Radical SAM core domain profile.	180	413	IPR007197	GO:0003824\|GO:0051536
	Mepo1g02632	449	SFLD	methyltransferase (Class A)	81	423	-	-
	Mepo1g02632	449	PANTHER	23S RRNA METHYLTRANSFERASE	60	428	IPR040072	-
	Mepo1g02632	449	SUPERFAMILY	Radical SAM enzymes	182	400	-	-
	Mepo1g02632	449	FunFam	Dual-specificity RNA methyltransferase RlmN	147	426	-	-
	Mepo1g02632	449	Pfam	Radical SAM superfamily	189	355	IPR007197	GO:0003824\|GO:0051536
	Mepo1g02632	449	CDD	Radical_SAM	193	393	-	-
	Mepo1g02632	449	Hamap	Dual-specificity RNA methyltransferase RlmN [rlmN].	82	427	IPR027492	GO:0030488\|GO:0070475
	Mepo1g02632	449	Gene3D	Aldolase class I	146	426	IPR013785	-
	Mepo1g02632	449	NCBIfam	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	80	421	IPR027492	GO:0030488\|GO:0070475
	Mepo1g02632	449	Pfam	4Fe-4S single cluster domain	193	288	-	-
	Mepo1g02632	449	SFLD	adenosine C2 methyltransferase (RlmN-like)	81	423	IPR004383	GO:0006364\|GO:0008173

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo1g02632	Mepo-Chr1	27721383	27728515	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo1g02632	K06941		K22544	gmx:100813692	689.108

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo1g02632	1	27721383	27728515	Mepo1g02632	1	27721383	27728515	ECH