Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02595 ATGGCAAACAACAAAGACATTGAAACAGTGATCAGAAGAGTCACTTCTGTAACCAACCACCTTGTTTCCTCTCCAACATCAATATCACCACCTCAGCTTATTTCCTTGTGTCACACTTCAAGTTACCAACGTGTTCATGGTGATGTTCCTTCTCATGACGTAGTTTGGAAGGTTGTTCCTTCTGATGATGATGAAGGAAAGGTTTTCACTGACATTGTCTATGAGAAATCTGTTGGTGAAGGAATTGCCAAGATTAGTATTAATAGGCCAGAGAGAAGGAATGCTTTTCGACCTCACACGGTTAAGGAGCTTATTCATGCTTTCAATGATGCTAGAGATGATCCCTCTGTTGGTGTCATCATTCTCACTGGAAAGGGAACAGATGCATTCTGTAGTGGTGGCGACCAAGCCTTGAGGACTCCAGATGGTTATTCTGATCATGAAAATATCGGTCGCCTTAATGTGTTAGACTTGCAGGTGCAGATTCGCCGCCTTCCAAAACCAGTAATCGCAATGGTAGCAGGGTATGCTGTTGGAGGAGGCCATATATTGCACATGGTTTGTGATCTAACCATTGCAGCAGATAATGCTATCTTTGGCCAAACTGGTCCTAAGGTTGGGAGCTTTGATGCTGGTTATGGAAGTTCTATCATGTCACGTTTGGTAGGTCCGAAAAAAGCGCGCGAAATGTGGTTTCTCACGCGGTTCTATACTGCTGCTGAAGCAGAGAAAATGGGCCTTGTCAATACTGTTGTACCACTAGAGAATTTAGAGAAAGAAACAATAAAATGGTGTAGGGAGATACTCAGGAATAGCCCAACTGCAATTCGGGTTCTCAAGGCAGCTATTAATGCAGTCGATGATGGGCACGCCGGACTTCAGGAAATGGGTGGAAATTCAACATTGATATTTTATGGCACTGAAGAAGCAAATGAAGGAAAAACTGCATATATGGAGCGTCGACGCCCGGATTTTTCTAAGTTTAATAGAAGACCATAA 999 0.4314 MANNKDIETVIRRVTSVTNHLVSSPTSISPPQLISLCHTSSYQRVHGDVPSHDVVWKVVPSDDDEGKVFTDIVYEKSVGEGIAKISINRPERRNAFRPHTVKELIHAFNDARDDPSVGVIILTGKGTDAFCSGGDQALRTPDGYSDHENIGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLTRFYTAAEAEKMGLVNTVVPLENLEKETIKWCREILRNSPTAIRVLKAAINAVDDGHAGLQEMGGNSTLIFYGTEEANEGKTAYMERRRPDFSKFNRRP 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02595 332 FunFam 1,4-dihydroxy-2-naphthoyl-CoA synthase 270 320 - -
Mepo1g02595 332 CDD crotonase-like 72 268 - -
Mepo1g02595 332 Gene3D - 53 271 - -
Mepo1g02595 332 FunFam 1,4-dihydroxy-2-naphthoyl-CoA synthase 51 269 - -
Mepo1g02595 332 NCBIfam 1,4-dihydroxy-2-naphthoyl-CoA synthase 69 328 IPR010198 GO:0008935|GO:0009234
Mepo1g02595 332 Hamap 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 56 331 IPR010198 GO:0008935|GO:0009234
Mepo1g02595 332 SUPERFAMILY ClpP/crotonase 71 327 IPR029045 -
Mepo1g02595 332 Pfam Enoyl-CoA hydratase/isomerase 80 326 IPR001753 -
Mepo1g02595 332 Gene3D - 272 320 IPR014748 -
Mepo1g02595 332 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 3 332 - -
Mepo1g02595 332 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 170 190 IPR018376 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02595 Mepo-Chr1 27381251 27384715 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02595 1 332 Acyl Lipid Metabolism Gene Families AT1G60550 76.106 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02595 K01661 - gmx:100807101 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02595 1 27381251 27384715 Mepo1g02595 1 27381251 27384715 ECH