Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02313 ATGACAACACTAGTAAAACACAGCGTGCGTGTAGTTGATGCTGCAACTATGGCTGTGTTGCTGCAAACACATTACACTCTCTCTCTACCCTCACCACGTTACCCTTATCTCTTCTCAATTCGAAACCCTAACTCTATTGTCTACAATTTTCTAACCCCCACTACACCTCTCAAATCTCAATTACAATTCTCCAATCACTGGAATCCAACACACCGTTCGCCGGCGTCACCGGTCTCCGCCTCCCGCCGGGAAACTTTAGATACGACGCCACTCAACTTGCCCCGTGCTTTCGTGCACCTCGCAGTCTCCGCCGCTCTGTTTCTATGCTGTGGTGTTCGCGTTTGTTCGGCTTCTTTGCCTCCTCTAACTAACGTGGTTCAGCAAGAACAAACCATTCAAGATGATAATGATGCAAGGACACATGATGCCAATGAAAATATAGATGTAGATAAGGAATTAGAAGCATCCTTTAATGCTTGGAAGTCTAAAACGTATGCATTGACAGTTCCTTTGAAAGTTGTTGCTTTGCGTGGCTCTATTCCTCCTTCATGGATCAAGGATTTCATAAATTCTCAAGGGAATAGAATGAAATTTAAGGTGAAATATTATGCAACTCTCGAGAATATCTTCTCTGACTTATCCATTCCCTTTACCAAAGGTGATCATGTCCCAACAACTGCTTTGGCAGCTGATATTGTCGGTATTGGTGACTCGTGGCTCAGATTTGCCGTTAAAAAAGCTATAATTGAGCCAATAAAAGATGTAGAAGGTCAAGAATGGTTTAAAAACTTAGCTGAGAAATGGAAGGTATATCTACGCAGGAACTGTGAGGGAGAAGTGGATCCTGAAGGTGATATATGGGCTGCCCCATATCGATGGGGCTGCATGGTAATAGCATACAAGACAAATAGTTTTCAAAAGCATAAGTTGGCTCCAATAGAGGACTGGGCAGATCTGTGGCGGCCTGATCTTGCAGGGAGGATTTCCATGGTAGACTCTCCGAGAGAAGTTGTTGGTGCAGTCTTAAAGTATATGGGGGCTTCCTATAATGCAAATGACATCAATTTGGAAGTTAATGGAGGGAGAGATGCTGTTAAACATAATTTAGCATTGCTTGCAAAACAGGTTCGACTCTTTGATAGTGAAAACTATCTAAAGGCTTTTGGAGTTGGAGATGTGTGGGTAGCTGTTGGATGGAGTAGTGATATTATTCCTGTTGCTAAACGGATGTCTAATGTTGCAGTTATTGTTCCAAAGTCTGGAGTGAGTTTATGGGCTGATCTTTGGGCAATTCCTGCTGCCTCAAAGATTCAAACGAGTCGGATTGGTGGGCGCATCAGGGGACCATCTCCATTAATTCATCAGTGGATAGAGTTTTGTCTGCAATCTGCAAGAGCACTGCCCTTCAAGCAGGAGGTGATCCCAGGTGCCTCTCCCCCTCTTCTTCAAGGTCATTACACCAATGTGGCCTTGGAGTTAACTAAGGGTAGGCCAAGGCTAGTCACCAATCTCATTGATGGAGCACCACCACCTGACATTTTAGAAAGGTGTGAATTTCTAGAGCCATTATCTAATTGCGCAGTATCCGATTACCACTGGTTGCTTGCCTCAATCCAGGAACCTGGCAAAGGATTGATACACAAAATGCGTCAGTATATCTCATCATTGGTTACATATTCTGGGCGGTCTAATTCAAAGCTGACTTGA 1707 0.4388 MTTLVKHSVRVVDAATMAVLLQTHYTLSLPSPRYPYLFSIRNPNSIVYNFLTPTTPLKSQLQFSNHWNPTHRSPASPVSASRRETLDTTPLNLPRAFVHLAVSAALFLCCGVRVCSASLPPLTNVVQQEQTIQDDNDARTHDANENIDVDKELEASFNAWKSKTYALTVPLKVVALRGSIPPSWIKDFINSQGNRMKFKVKYYATLENIFSDLSIPFTKGDHVPTTALAADIVGIGDSWLRFAVKKAIIEPIKDVEGQEWFKNLAEKWKVYLRRNCEGEVDPEGDIWAAPYRWGCMVIAYKTNSFQKHKLAPIEDWADLWRPDLAGRISMVDSPREVVGAVLKYMGASYNANDINLEVNGGRDAVKHNLALLAKQVRLFDSENYLKAFGVGDVWVAVGWSSDIIPVAKRMSNVAVIVPKSGVSLWADLWAIPAASKIQTSRIGGRIRGPSPLIHQWIEFCLQSARALPFKQEVIPGASPPLLQGHYTNVALELTKGRPRLVTNLIDGAPPPDILERCEFLEPLSNCAVSDYHWLLASIQEPGKGLIHKMRQYISSLVTYSGRSNSKLT 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02313 568 CDD PBP2_PotD_PotF_like_1 170 536 - -
Mepo1g02313 568 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 332 351 IPR001188 GO:0015846|GO:0019808|GO:0042597
Mepo1g02313 568 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 418 437 IPR001188 GO:0015846|GO:0019808|GO:0042597
Mepo1g02313 568 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 314 328 IPR001188 GO:0015846|GO:0019808|GO:0042597
Mepo1g02313 568 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 285 301 IPR001188 GO:0015846|GO:0019808|GO:0042597
Mepo1g02313 568 SUPERFAMILY Periplasmic binding protein-like II 171 436 - -
Mepo1g02313 568 PANTHER SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN 97 538 - -
Mepo1g02313 568 Pfam Bacterial extracellular solute-binding protein 230 465 - -
Mepo1g02313 568 Gene3D - 294 445 - -
Mepo1g02313 568 MobiDBLite consensus disorder prediction 64 83 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02313 - - aprc:113857970 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02313 1 23874323 23878229 Mepo1g02313 1 23874323 23878229 ECH