Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02309 ATGCACTTTACAATGGATTTCGCAAAACACATTACTACTAAACCCCCCATTCTCTTCACACGCCTCCTAACCTGGATCACCTCAACTCTCCCCCGCTACCGTCACATTCCACCACCACAACCGCCGCCGCCTCCACAACCTCCTTCTCCTCCACCAACCACCCTTCCTTCAATCCTCACTCACAAAGTTCTAGATTCTTCCAAATGCAAAACCCTAATACCTAACCTAACTCCACACGAATTCGAACACTCATTCTTCACTCATCACACCACCGTTAACCTCAAGACCACACTCGATTTCTTCAGTTTCGCTTCAAAAAATTTCAAATTCCGTTTCACCGTTCGTTCTTATTGCATCTTAATTCGTTTGCTTCTAGCTTCGAATCATATACCGCGTGCTAGGTTTACGTTGAAACGGTTAATTGAAGGTAATGCTAAAACGCCGTTAAAGAAAACTGATGCTAGGTTAAGTGAAATAGCTTCGGCGTTTTTGGAATTGAGTGAGCGAAGTCATGGGGAGTTAGATATGTTGATTTATATTCTGTGTTCACAGTTTCAGCATTTAGGATTTCATTGGGCTTTTGATGTTTTCATGTTGTTTACTAGTAAGGGTGTTTTTCCTTCCCTGAAAAGTTGTAATTTTTTGATGAGTTCGTTGGTGAAGAGTAATGAGCTTCATAAGAGTTTTAGGGTTTTTGACGCCATGTGCCGCGGTGGTGTTTTGATTGATGTTTATACTTATGCGACTGCGATTAACGCGTATTGTAAAGGTGGGAAGGTTGATGAGGCTGTTGGGTTGTTTTTGAGAATGGGGGAGGGAGGTGTTTTGCCAAATGTGGTTACTTACAATAACTTGATTGATGGGTTAATTAAGAGTGGAAGGTTAGAAGAAGCTTTAATGTTTAAGGACAGGATGGTTGAGAATAAAGTGAACCCTAGTTTGGTAACTTATGGGATTCTTGTGAATGGTTTGATGAAGTTTGAGAAATTTGATGAGGCGAATTCGGTTTTGGTTGAAATGTATAGCAAGGGGTTTTCTCCCAATGAGTTTGTTTTTAATGCACTTATTGATGGGTATAGCAGAAAAGGGAATATGGATGATGCATTGAGGGTTAGGGATGATATGATGTTGAAGGGATTGAAACCGAATGCTGTTACTCTTAATACTCTTTTACAGGGTTTTTGTAGGACCAATCAAATGGAGCAAGCTGAACAAGTTTTAGAGTACTTGTTATCAAACGGTTTGTCAGTTAATGAGGACGCGTGTTCTTATGTGCTTCACTTGTTATGCAAGAGTTCCAAGTTTGATTCAGCCTTGAAAATTGTTAAGGAGTTGTTGTTGAGGAACATTAAGGTTAATGATAGCTTGCTAACTTTGTTGGTTGGTGGACTTTGTAAATATGGAAAACATTTGGAGGCAATTGAGCTTTGGTTTAGACTAGCAGATAAGAAAGGGTTTAGAGCGAATACAGCAACCTCAAATGCACTTCTCTATGGACTTTGTGAAAGGGGGAACGTGGAAGAGGTATTTCCGGTAGGTAAAGAAATGGTGGAGAGAGGTTTGGTGCTTGATGGTATTTCATACAACACACTTATTTTTGGCTGTTGTAAATCGGGTAAAATCGAGGAAGCTTTCAAGCTTAAGGAAAAGATGGTGAAGCAAGGATTCAAACCTGATACTTATACCTACAATTTCCTAATGAAAGGGTTAACTGATAAGGAAAAAATAGATGATGTTGATAGGGTTTTGCATGAAGCCGAAGAACGTGGTGTGGTTCCAAATATCTACACATATGCAATAATGTTGGAAGGATATTGTAATGCTGATATGATTGATAATGCTATGAGCTTGTTCAACAAGTTAGTTTATAACAGAGTAGAACTTAGTTCTGTTGTTTATAACATACTTATTGCAGCCCATAGTAAAGCTGGGAATTTTATGGAAGCCTTCAAACTCCGCGATGCTATGAAAAACAGCGACGTTCATCCTACGATTTTCACATATTCTTCTATAATACATGGTATGTGCTGTAATGGCCTTGTTGAGGAAGCAAAGGGAATTTTTGAAGAAATGAGAAATGAAGGATTGATGCCAAATGAGTTTTGTTATACTGCTCTAATTGGTGGTTACTGCAAGTTAGGTAAGATGGATCAAATAGAGAGTATCTTACAGGAAATGACATCAAAATGTATACAGCCTAATAAAATTACCTATACTATTATGATTGATGGTTATTGCAAAATGGGAAATACGAAAGAAGCGACTAAGCTTTTAAATGAGATGATAGCAAATGGAATATCACCAGATACTGTTACTTACACTGTATTGCAAAAAGGATATTGCAAGGAAAATGAGCTTGAAGAAACTCTTCAAGGCGATACAGCAGTACCCTTAGAAGAAATAACATACACCACATTGGTTGACAAGTTGCATCCACATTCAGATGCAGCACTTAGTAATCGTGAATAA 2469 0.3848 MHFTMDFAKHITTKPPILFTRLLTWITSTLPRYRHIPPPQPPPPPQPPSPPPTTLPSILTHKVLDSSKCKTLIPNLTPHEFEHSFFTHHTTVNLKTTLDFFSFASKNFKFRFTVRSYCILIRLLLASNHIPRARFTLKRLIEGNAKTPLKKTDARLSEIASAFLELSERSHGELDMLIYILCSQFQHLGFHWAFDVFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKVDEAVGLFLRMGEGGVLPNVVTYNNLIDGLIKSGRLEEALMFKDRMVENKVNPSLVTYGILVNGLMKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMMLKGLKPNAVTLNTLLQGFCRTNQMEQAEQVLEYLLSNGLSVNEDACSYVLHLLCKSSKFDSALKIVKELLLRNIKVNDSLLTLLVGGLCKYGKHLEAIELWFRLADKKGFRANTATSNALLYGLCERGNVEEVFPVGKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMVKQGFKPDTYTYNFLMKGLTDKEKIDDVDRVLHEAEERGVVPNIYTYAIMLEGYCNADMIDNAMSLFNKLVYNRVELSSVVYNILIAAHSKAGNFMEAFKLRDAMKNSDVHPTIFTYSSIIHGMCCNGLVEEAKGIFEEMRNEGLMPNEFCYTALIGGYCKLGKMDQIESILQEMTSKCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETLQGDTAVPLEEITYTTLVDKLHPHSDAALSNRE 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02309 822 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 734 768 IPR002885 -
Mepo1g02309 822 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 699 733 IPR002885 -
Mepo1g02309 822 Pfam PPR repeat 589 620 IPR002885 -
Mepo1g02309 822 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 524 558 IPR002885 -
Mepo1g02309 822 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 278 312 IPR002885 -
Mepo1g02309 822 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL 424 716 - -
Mepo1g02309 822 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 629 663 IPR002885 -
Mepo1g02309 822 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 313 347 IPR002885 -
Mepo1g02309 822 Gene3D Tetratricopeptide repeat domain 682 820 IPR011990 GO:0005515
Mepo1g02309 822 Pfam PPR repeat 492 521 IPR002885 -
Mepo1g02309 822 Pfam PPR repeat 458 480 IPR002885 -
Mepo1g02309 822 MobiDBLite consensus disorder prediction 34 55 - -
Mepo1g02309 822 Gene3D Tetratricopeptide repeat domain 87 302 IPR011990 GO:0005515
Mepo1g02309 822 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 559 593 IPR002885 -
Mepo1g02309 822 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 348 382 IPR002885 -
Mepo1g02309 822 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 594 628 IPR002885 -
Mepo1g02309 822 SUPERFAMILY HCP-like 432 658 - -
Mepo1g02309 822 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 383 417 IPR002885 -
Mepo1g02309 822 Pfam PPR repeat family 347 396 IPR002885 -
Mepo1g02309 822 Pfam PPR repeat family 629 676 IPR002885 -
Mepo1g02309 822 Pfam PPR repeat family 526 570 IPR002885 -
Mepo1g02309 822 Pfam PPR repeat family 698 747 IPR002885 -
Mepo1g02309 822 Pfam PPR repeat family 209 256 IPR002885 -
Mepo1g02309 822 Pfam PPR repeat family 277 326 IPR002885 -
Mepo1g02309 822 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 664 698 IPR002885 -
Mepo1g02309 822 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 489 523 IPR002885 -
Mepo1g02309 822 NCBIfam pentatricopeptide repeat 385 419 IPR002885 -
Mepo1g02309 822 NCBIfam pentatricopeptide repeat 701 734 IPR002885 -
Mepo1g02309 822 NCBIfam pentatricopeptide repeat 526 560 IPR002885 -
Mepo1g02309 822 NCBIfam pentatricopeptide repeat 280 313 IPR002885 -
Mepo1g02309 822 NCBIfam pentatricopeptide repeat 666 700 IPR002885 -
Mepo1g02309 822 NCBIfam pentatricopeptide repeat 211 243 IPR002885 -
Mepo1g02309 822 NCBIfam pentatricopeptide repeat 315 349 IPR002885 -
Mepo1g02309 822 NCBIfam pentatricopeptide repeat 736 770 IPR002885 -
Mepo1g02309 822 NCBIfam pentatricopeptide repeat 351 384 IPR002885 -
Mepo1g02309 822 NCBIfam pentatricopeptide repeat 245 279 IPR002885 -
Mepo1g02309 822 NCBIfam pentatricopeptide repeat 596 621 IPR002885 -
Mepo1g02309 822 NCBIfam pentatricopeptide repeat 561 595 IPR002885 -
Mepo1g02309 822 NCBIfam pentatricopeptide repeat 631 664 IPR002885 -
Mepo1g02309 822 Gene3D Tetratricopeptide repeat domain 377 447 IPR011990 GO:0005515
Mepo1g02309 822 Gene3D Tetratricopeptide repeat domain 303 376 IPR011990 GO:0005515
Mepo1g02309 822 Gene3D Tetratricopeptide repeat domain 465 575 IPR011990 GO:0005515
Mepo1g02309 822 Gene3D Tetratricopeptide repeat domain 576 681 IPR011990 GO:0005515
Mepo1g02309 822 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 243 277 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02309 539 820 Glycosyltransferase AT1G05670 30.556 1.41e-35 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02309 - - gmx:100819570 1057.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02309 1 23841649 23844117 Mepo1g02309 1 23841649 23844117 ECH