Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02301 ATGGAACCAGTTTCAAAAAACCCTAGAACAACAAAATCTTCAAGATACTCATCAAAATCTAAAAACCCTAACAAAAATTCTACCCCAAATTCCAAACCCAATGAATTCCCATCTCATCTTGACACCCCAAACGTATCTTCAACAGCTAGAACCCTTTGCAATCTCCTCACCCGAACATCACCTCAGGATATCGATAATGCGTTATCCTCATCCGGGGTTCATCCTTCTGAAGAATGTGTTCATGAGGTTTTGAAACTTTCTTATAACTATCCGTCGTCGGCCATCAAGTTCTTTAGGTGGGCTGGGCGTTTGAGAAAACACTCTGCACATGCCTGGAACTTGATGGTTGATCTGCTGGGCCGGAACCAGCTTTTTGAACCTATGTGGGATGCTGTTAGGACTATGAAACAGGAAGGTGTGCTGTCATTGCCCACCTTTGTTTCGGTTTTTCAAAGTTATTGTATGGCTGGTAGGGTTGATGAGGCTGTTATGAGTTTTGATGTGATGGATAGGTATGATATTGAGAAGAATGTTGTCGCCGTTAATTCTTTGCTTAGCGCGATTTGTAGAGAAGAGAATCAGACTTCGGTGGGTGTGGAGTTTTTAGAGAAAAAGGTTAAGGGAAAGGGTGAAGGGGGAAAGGGTGAAGGGAAGATTGAGTTGGATGGGGATAGTTATGCCATATTGCTTGAAGGGTGGGAGAAGGAAGGGAATGCTGCTAAAGCTAAAACTACTTTTGGTGAGATGGTGATCCGTGTTGGTTGGAGTCAAGATAATATAGCAGCTTACGATGCGTTTTTGATGACTTTACTTCGGGCTTTGCAGTTTGATGAGGTTGTGGGGTTTCTTAAAGTTATGAAGGACCATGACTGCTTTCCAGGTTTGAAATTCTTTACCAATGCTCTTGATGTGCTTGTTAAGCGTAACGATGCTGCTCATGCCATCCCTTTGTGGGATGTCATGGTTGTTAGTGGATTATTGCCTAACTTGATCATGTATAATGCCATGATTGGGTTGCTTTGCAACAATGACGAGATTGATCATGCGTTTCGCCTGCTCGATGAGATGGTTCTACATGGCGCTTTTCCCGACTCTTTGACTTATAACATGGTTTTTGAGTGCTTAGTGAAGAACAAAAAAGTTCGTGAAACGGAGAGGTTCTTTGCTGAGATGATCAAGAATGAGTGGTTGCCCACGGCTTCTAATTGTGCTGTAGCCATTGAAATGTTGTTTGATTGTGACGACCCTGATGCGGCACTTGAGATTTGGAGTTACATGGTTGAAACTCGCGTTAGGGTGCTTGATGTGAGTGCAAACATGGTGCTTATTGGTCTTTGCAAATTGAAAAGACTGTCAGAGGTTAGAAGGTTTGCTGAAGAAATGCTTGATAAAAGGATCACCATATATGATTCTACAATGAGCAAGTTGAAGGAAGCATTCTATAAAGACAGTAGAAGTACAAGTGCAAGAGACAAATTTGATGCTATTTACAGGAGATGGAAAGCTCATGTCAAGTTGTAA 1521 0.4208 MEPVSKNPRTTKSSRYSSKSKNPNKNSTPNSKPNEFPSHLDTPNVSSTARTLCNLLTRTSPQDIDNALSSSGVHPSEECVHEVLKLSYNYPSSAIKFFRWAGRLRKHSAHAWNLMVDLLGRNQLFEPMWDAVRTMKQEGVLSLPTFVSVFQSYCMAGRVDEAVMSFDVMDRYDIEKNVVAVNSLLSAICREENQTSVGVEFLEKKVKGKGEGGKGEGKIELDGDSYAILLEGWEKEGNAAKAKTTFGEMVIRVGWSQDNIAAYDAFLMTLLRALQFDEVVGFLKVMKDHDCFPGLKFFTNALDVLVKRNDAAHAIPLWDVMVVSGLLPNLIMYNAMIGLLCNNDEIDHAFRLLDEMVLHGAFPDSLTYNMVFECLVKNKKVRETERFFAEMIKNEWLPTASNCAVAIEMLFDCDDPDAALEIWSYMVETRVRVLDVSANMVLIGLCKLKRLSEVRRFAEEMLDKRITIYDSTMSKLKEAFYKDSRSTSARDKFDAIYRRWKAHVKL 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02301 506 NCBIfam pentatricopeptide repeat 367 399 IPR002885 -
Mepo1g02301 506 NCBIfam pentatricopeptide repeat 331 364 IPR002885 -
Mepo1g02301 506 Gene3D Tetratricopeptide repeat domain 256 380 IPR011990 GO:0005515
Mepo1g02301 506 Gene3D Tetratricopeptide repeat domain 381 499 IPR011990 GO:0005515
Mepo1g02301 506 Gene3D Tetratricopeptide repeat domain 78 200 IPR011990 GO:0005515
Mepo1g02301 506 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 142 176 IPR002885 -
Mepo1g02301 506 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL 13 499 - -
Mepo1g02301 506 MobiDBLite consensus disorder prediction 1 44 - -
Mepo1g02301 506 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 329 363 IPR002885 -
Mepo1g02301 506 Pfam PPR repeat family 328 377 IPR002885 -
Mepo1g02301 506 Pfam PPR repeat 436 465 IPR002885 -
Mepo1g02301 506 Pfam PPR repeat 145 172 IPR002885 -
Mepo1g02301 506 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 364 398 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02301 Mepo-Chr1 23720454 23722510 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02301 259 505 Glycosyltransferase AT1G05670 20.648 3.28e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02301 - - gmx:100796114 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02301 1 23720454 23722510 Mepo1g02301 1 23720454 23722510 ECH