Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02273 ATGGACGCTCGCCGGAGACTTAAATCTCTTCCTCCACGTTCTCCCACCGGCGGCGAAAACCTCAAAACCCAGAAGCTTAAATCTCTTCCTACGACCACCACCGGAGAAAACCTCAATTCACAGACCGTTTTTCTCTGTGTCACTAATGCCGTTTTCTTCGGTGTTTTCTTCTCCGTTGCATATTTTCTCCTCCACCGTTGGCGTGAGAAGATCCGTACGGAAACACCTCTTCATGTCGTCACAGTCTCTGAAACCGCCGCAATCGTTTCTCTGATAGCCTCCGCCGTTTACCTTCTAGGTTTCTTCGGTATCGGATCACGTACTTCCTTCCCGGACGATCTCTCCGATGAAGAGATTCTCGCTAAAGAAGACTCACGAAAACCAGGACCGTGTCCAGCAGCACTTGTCGACACCGACGTAAAACCACCACCGGCAATTGTAGCTCCGGTGAAGATCTATGAAGTTGTTGCACCGGTGAATCTCACACCGGAAGACGAGGAAATTGCAAAATCAGTTGTCACCGGTTCAATTCCGTCGTATTCCTTAGAATCAAGACTAGCAGACTGCCGTAAAGCGGCGGCGATACGTCGTTCAGCGGTGCAAACAATAACTGGAAAATCTCTAGAAGGTTTACCGTTGGAAGGTTTCGATTACGATTCGATATTGGGACAGTGTTGTGAGATGCCGATAGGGTTTGTTCAAATTCCGGTTGGTGTTGCAGGTCCACTGTTGTTAGATGGAGTTGAGTACACTGTACCCATGGCTACCACTGAAGGGTGTCTTGTTGCAAGTACCAATAGAGGGTGTAAAGCTATTCATGTTTCTGGTGGAGCTTCTTCTGTGTTGCTTAGAGATGGAATGACTAGAGCACCTGTTGTTAGGTTTTCGTCGGCGAAAAGAGCTGCTGAGTTGAAGTTTTTCTTGGAAGATCCGCTTAATTTTGATACACTTGCTGTCACTTTCAACAAGTCAAGCAGATTTGCTAGATTGCAGAGCCTTCAGCCTACAATTGCTGGCAAGAATTTGTACATTCGATTCCGTTGCAGTACTGGTGATGCCATGGGGATGAACATGGTGTCAAAAGGTGTTCAAAATGTCCTTGATTTTCTTCAGAGTGACTTCCCTGACATGGATGTCATTGGAATCTCAGGAAATTTCTGTTCCGACAAGAAAGCGGCGGCTGTAAACTGGATTGAAGGGCGTGGTAAGTCTGTGGTGTGTGAGGCTGTTATTAAGGAAGAGGTGGTGAAGAAAGTGTTGAAGACTAGTGTGGAGGCACTGGTTGAGCTTAACATGCTTAAGAACCTAACTGGATCAGCCCTTGCTGGTGCTCTTGGTGGATTCAATGCTCATGCTAGCAATATTGTCTCTGCTGTCTACATAGCCACTGGTCAGGATCCTGCTCAGAATGTTGAGAGTTCTCACTGTATTACCATGATGGAACCCGTGAATGATGGCAAGGACCTTCACATATCTGTCACCATGCCTTCCATTGAGGTTGGTACTGTGGGAGGGGGAACACAACTTGCATCTCAGTCTGCTTGTCTTAATTTACTTGGTGTTAAGGGCGCCAACACAGAATCTCCAGGTGCAAATGCTAGGCTATTGGCCACCATTGTTGCCGGTTCAGTACTCGCTGGTGAGCTATCACTCATGTCTGCAATTGCAGCTGGCCAACTAGTTAAGAGTCACATGAAATACAACAGATCTAGCAGGGATATGTCCAAAATCGTCTCGTGA 1740 0.4701 MDARRRLKSLPPRSPTGGENLKTQKLKSLPTTTTGENLNSQTVFLCVTNAVFFGVFFSVAYFLLHRWREKIRTETPLHVVTVSETAAIVSLIASAVYLLGFFGIGSRTSFPDDLSDEEILAKEDSRKPGPCPAALVDTDVKPPPAIVAPVKIYEVVAPVNLTPEDEEIAKSVVTGSIPSYSLESRLADCRKAAAIRRSAVQTITGKSLEGLPLEGFDYDSILGQCCEMPIGFVQIPVGVAGPLLLDGVEYTVPMATTEGCLVASTNRGCKAIHVSGGASSVLLRDGMTRAPVVRFSSAKRAAELKFFLEDPLNFDTLAVTFNKSSRFARLQSLQPTIAGKNLYIRFRCSTGDAMGMNMVSKGVQNVLDFLQSDFPDMDVIGISGNFCSDKKAAAVNWIEGRGKSVVCEAVIKEEVVKKVLKTSVEALVELNMLKNLTGSALAGALGGFNAHASNIVSAVYIATGQDPAQNVESSHCITMMEPVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGANTESPGANARLLATIVAGSVLAGELSLMSAIAAGQLVKSHMKYNRSSRDMSKIVS 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02273 579 SUPERFAMILY NAD-binding domain of HMG-CoA reductase 286 402 IPR009023 -
Mepo1g02273 579 Gene3D - 236 564 IPR023074 GO:0004420
Mepo1g02273 579 Gene3D - 161 235 IPR023282 GO:0004420
Mepo1g02273 579 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 286 402 - -
Mepo1g02273 579 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 434 460 IPR002202 GO:0004420|GO:0015936
Mepo1g02273 579 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 383 408 IPR002202 GO:0004420|GO:0015936
Mepo1g02273 579 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 343 361 IPR002202 GO:0004420|GO:0015936
Mepo1g02273 579 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 488 509 IPR002202 GO:0004420|GO:0015936
Mepo1g02273 579 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 225 246 IPR002202 GO:0004420|GO:0015936
Mepo1g02273 579 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 252 272 IPR002202 GO:0004420|GO:0015936
Mepo1g02273 579 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 161 235 - -
Mepo1g02273 579 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 389 564 - -
Mepo1g02273 579 Gene3D - 286 402 IPR009023 -
Mepo1g02273 579 ProSiteProfiles Hydroxymethylglutaryl-coenzyme A reductases family profile. 165 569 IPR002202 GO:0004420|GO:0015936
Mepo1g02273 579 PANTHER 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 39 572 IPR002202 GO:0004420|GO:0015936
Mepo1g02273 579 CDD HMG-CoA_reductase_classI 166 569 IPR004554 GO:0004420|GO:0005515|GO:0008299
Mepo1g02273 579 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 2. 500 507 IPR023076 GO:0004420
Mepo1g02273 579 NCBIfam hydroxymethylglutaryl-CoA reductase (NADPH) 165 569 IPR004554 GO:0004420|GO:0005515|GO:0008299
Mepo1g02273 579 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 3. 554 567 IPR023076 GO:0004420
Mepo1g02273 579 MobiDBLite consensus disorder prediction 16 33 - -
Mepo1g02273 579 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 1. 345 359 IPR023076 GO:0004420
Mepo1g02273 579 MobiDBLite consensus disorder prediction 1 33 - -
Mepo1g02273 579 SUPERFAMILY Substrate-binding domain of HMG-CoA reductase 159 558 IPR009029 GO:0015936|GO:0016616
Mepo1g02273 579 Pfam Hydroxymethylglutaryl-coenzyme A reductase 193 569 IPR002202 GO:0004420|GO:0015936
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02273 Mepo-Chr1 23383409 23387022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02273 1 575 Lipid Metabolism Gene Families AT1G76490 70.389 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02273 K00021 - gmx:100815480 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02273 1 23383409 23387022 Mepo1g02273 1 23383409 23387022 ECH
Mepo5g01128 5 11413775 11417375 Mepo1g02273 1 23383409 23387022 PCT