Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02212 ATGAACAACATCTTCAAGATCATGCTTTGGACTCGTTCTCTAACCCACTTCAGATCAACCCACCACACCTTCTCACGTAAATTCTCAAACTTTTCTAAGGACCCTGATCGAGGATCATGGGAATCAATGGAAGGGCTACTTCATTGCCATGCAAACACTGATCCTTTGTCACCTATCAACTTCTTGGAGAGAGCAGCAAAGGTTTGTAGAGACAGAACATCTCTTGTGTATGGTTCTTTGAAGTATAATTGGGGTCAAACTCATCAACGTTGTCTCAAACTTGCTTCTTCTCTTACCCAGTTTGGGATTTCCCGTGGAGATGTGGTTGCCACACTAGCACCTAATGTCCCTGCAATGTATGAGCTGCATTTCGCAGTACCAATGGCTGGAGCCATTCTTTGTACCCTTAATTCGCGTTTAGATGCAGCTATGGTTTCAGTCCTGCTCGAGCATTCACAAGCAAAGATCCTTTTTGCAGACCACCAACTACTTGAAATTGTTCAAGGAGCATTGGACTTGCTTCGTGAAAAACGAACGGAAATGCCAATTATAGTCTTAGTTACCGATTCTCATTGCTCATCTACGATTGCCATTACATCAACGAGTTACGAGTATGAGAAGCTAATAGAAGTTGGGCATAACGGGTTCAATATAGTGAAACCACAAAGTGAATGGGATCCTATAAGTATAAATTACACCTCAGGAACCACATCTAGACCTAAAGGAGTTGTCTACAGCCATAGAGGTGCTTATTTAAACTCTTTAGCAACAGTTCTACTCTTTCAAATGGACATCTTTCCTGTTTATCTTTGGAACGTTCCGTTGTTCCATTGCAACGGTTGGTGTCTCCCTTGGGGAGTGGCAGCACAATTTGGAACAAATATTTGTCTAAGGAAAGTCTCTCCACAGAACATATTTGACAACATAATTCAGCATAAGGTGACACACATGGGAGGAGCTCCTACAGTGCTTAACATGATTTTAAATTCTGCGTCGACTCATAGAAAGCCACTCAATCACAAGGTTTTAGTGATGACAGGTGGTTCACCTCCACCACCACAGATTCTTTCCAAAATGGAAGAAATTGGTTTTAGTGTTTCTCACCTCTACGGCTTGACAGAAACATACGGTCCAGGGAGTTTTTGTGCGTGGAGACCTGAGTGGGACACATTGCCTCCTGAAGAAAGATCGAAGATGAAAGCTAGGCAAGGTGTACCACATGTAGCATTGGAGGAAATTGATGTTAAAGATTCTGGAACTATGGAAAGTGTTCCAGCTGACGGAAAAACAGTTGGCGAGATAATGTTTAGAGGGAATACAGTGATGAGTGGATATTTTAGAGATTTGAAAGCAACAGAAGAAGCTTTCAAAGACGGTTGGTTTCATAGTGGGGATCTAGCTGTGAAACACGCTGATGGATACATAGAAGTTAAGGATAGATTGAAGGATATAATAGTATCTGGGGGAGAAAACATTAGCTCGGTCGAGGTAGAAACTGTTTTGTATAGTCATCCAGCTGTTCTTGAGGCCGCAGTAGTTGCCCGACCGGATGATCATTGGGGTCAAACTCCTTGTGCTTTTTTGAAGCTGAAAGAGGGGTTTGATCAAAATGCTCAAGAAATAATCGCCTTTTGTAGGGAACGTTTGCCTCACTACGTGGCTCCTAAAACAGTAATTTTTCTCGATATGCCAAAGACTTCAACAGGTAAGATACAAAAGTATATTCTAAGGGAGAAAGCCAAGGCTTTGGGAAGTATATCTATATCCAGCCCCTTGAATTGTGAAAAAGCTGTTGTTGATTGCTCAAGGTACTTAGCAAGATAA 1824 0.4194 MNNIFKIMLWTRSLTHFRSTHHTFSRKFSNFSKDPDRGSWESMEGLLHCHANTDPLSPINFLERAAKVCRDRTSLVYGSLKYNWGQTHQRCLKLASSLTQFGISRGDVVATLAPNVPAMYELHFAVPMAGAILCTLNSRLDAAMVSVLLEHSQAKILFADHQLLEIVQGALDLLREKRTEMPIIVLVTDSHCSSTIAITSTSYEYEKLIEVGHNGFNIVKPQSEWDPISINYTSGTTSRPKGVVYSHRGAYLNSLATVLLFQMDIFPVYLWNVPLFHCNGWCLPWGVAAQFGTNICLRKVSPQNIFDNIIQHKVTHMGGAPTVLNMILNSASTHRKPLNHKVLVMTGGSPPPPQILSKMEEIGFSVSHLYGLTETYGPGSFCAWRPEWDTLPPEERSKMKARQGVPHVALEEIDVKDSGTMESVPADGKTVGEIMFRGNTVMSGYFRDLKATEEAFKDGWFHSGDLAVKHADGYIEVKDRLKDIIVSGGENISSVEVETVLYSHPAVLEAAVVARPDDHWGQTPCAFLKLKEGFDQNAQEIIAFCRERLPHYVAPKTVIFLDMPKTSTGKIQKYILREKAKALGSISISSPLNCEKAVVDCSRYLAR 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02212 607 FunFam Long-chain-fatty-acid--CoA ligase FadD 44 482 - -
Mepo1g02212 607 SUPERFAMILY Acetyl-CoA synthetase-like 45 581 - -
Mepo1g02212 607 Gene3D - 45 481 IPR042099 -
Mepo1g02212 607 Pfam AMP-binding enzyme C-terminal domain 496 570 IPR025110 -
Mepo1g02212 607 Pfam AMP-binding enzyme 63 487 IPR000873 -
Mepo1g02212 607 FunFam 2,3-dihydroxybenzoate-AMP ligase 482 584 - -
Mepo1g02212 607 ProSitePatterns Putative AMP-binding domain signature. 230 241 IPR020845 -
Mepo1g02212 607 PANTHER ACYL-ACTIVATING ENZYME 44 586 - -
Mepo1g02212 607 CDD ttLC_FACS_AEE21_like 55 578 - -
Mepo1g02212 607 Gene3D - 482 584 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02212 Mepo-Chr1 22769951 22774334 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02212 119 587 Miscellaneous Gene Families AT1G20560 62.420 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02212 - - cam:101512996 999.579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02212 1 22769951 22774334 Mepo1g02212 1 22769951 22774334 ECH
Mepo5g01070 5 10597745 10604913 Mepo1g02212 1 22769951 22774334 PCT