Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02160 ATGAGCGCTTCTAGGTTCATCAAGTGTGTTACTGTTGGGGATGGAGCTGTTGGTAAAACTTGTTTGTTAATTTCATACACCAGCAATACCTTCCCCACTGATTATGTGCCAACTGTCTTCGACAATTTCAGTGCAAATGTGGTTGTGAATGGAAGCACTGTGAATCTGGGTTTGTGGGACACTGCAGGACAAGAGGATTATAACAGATTAAGACCTTTGAGTTATCGTGGTGCCGACATTTTCATTCTCGCTTTCTCCCTCATAAGCAAGGCCAGTTATGAAAATGTTTCCAAAAAGTGGATTCCAGAGTTGAAGCATTATGCACCTGGTGTTCCCATTATTCTGGTTGGCACAAAGCTTGACCTTCGGGATGACAAGCAGTTCTTCGTCGACCATCCTGGTGCTGTTCCTATTACCACTGCTCAGGGAGAAGAGCTTAGGAAGCTGATCAATGCACCTGCTTATATTGAATGCAGTTCGAAATCACAGCAGAATGTGAAAGCAGTCTTTGATGCAGCCATAAGAGTTGTCCTTCAACCACCAAAGCAAAAGAAAAAGAAGAGTAAAGCACAAAAGGCTTGTTCGATATTGTGA 594 0.431 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADIFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPITTAQGEELRKLINAPAYIECSSKSQQNVKAVFDAAIRVVLQPPKQKKKKSKAQKACSIL 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02160 197 FunFam rac-like GTP-binding protein RHO1 5 192 - -
Mepo1g02160 197 ProSiteProfiles small GTPase Rab1 family profile. 2 197 - -
Mepo1g02160 197 NCBIfam small GTP-binding protein domain 7 171 IPR005225 GO:0005525
Mepo1g02160 197 PRINTS Transforming protein P21 ras signature 30 46 - -
Mepo1g02160 197 PRINTS Transforming protein P21 ras signature 47 69 - -
Mepo1g02160 197 PRINTS Transforming protein P21 ras signature 7 28 - -
Mepo1g02160 197 PRINTS Transforming protein P21 ras signature 155 177 - -
Mepo1g02160 197 PRINTS Transforming protein P21 ras signature 109 122 - -
Mepo1g02160 197 ProSiteProfiles small GTPase Ras family profile. 2 197 IPR001806 GO:0003924|GO:0005525
Mepo1g02160 197 Gene3D - 5 192 IPR027417 -
Mepo1g02160 197 SMART ras_sub_4 4 180 - -
Mepo1g02160 197 Pfam Ras family 8 178 IPR001806 GO:0003924|GO:0005525
Mepo1g02160 197 ProSiteProfiles small GTPase Rho family profile. 1 177 - -
Mepo1g02160 197 SMART rab_sub_5 7 180 - -
Mepo1g02160 197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 178 IPR027417 -
Mepo1g02160 197 PANTHER RHO FAMILY GTPASE 4 195 IPR003578 GO:0005525|GO:0007264
Mepo1g02160 197 CDD Rop_like 6 178 - -
Mepo1g02160 197 SMART rho_sub_3 9 180 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02160 Mepo-Chr1 22192400 22196390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02160 7 180 EF-hand Containing Proteins AT5G27540 25.862 8.48e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02160 K04392 - zju:107424469 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02160 1 22192400 22196390 Mepo5g01015 5 9994349 9997028 ECH
Mepo1g02160 1 22192400 22196390 Mepo1g02160 1 22192400 22196390 ECH
Mepo5g01015 5 9994349 9997028 Mepo1g02160 1 22192400 22196390 PCT