Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02080 ATGTCGTCGTTTTTTTCTTCCTTCACCTCCTCCTCATCGGAGACAAACCTAGCAACCGCAAAAACCATCCTCACCACCGCCGCCTCCATAGCCGGCACCGCCATGTTAATCCGTTCCGTCGCCAACGAGTTTCTCCCAATAGACATCCGTGACATCGTCTTCACCGGAATCAAATCCGCTTACTGTCGTTTCTCTACCGACGTAACGATGGTGATTGAAGAATTTGAAGGCCTTGATAATAACCAAATCTACTCCGCTGCAGAAACCTATCTCGGCACTATCGTTTCACCTTCAACAAAAAGGTTCCGTGTAAGCAAATCAGATCATCAACAAACTTTTACTCTTACAGTGGAGCGTGATCAATTGGTAACTGATTATTTCAACGGCGTTAAACTGAAGTGGATTCTCTTTTGTCGTCGCGCTGAAACTCATCGCAATAACGGTGACCTAACCTTTCCAGTGAAGTCAGAAGTACGTTCATTGGAACTAACTTTCAGCAGAAAACATAAAGACATGGTTCTCAAAAGCTACATTCCTTTTATTCTCGAAAAAGCAAGATTGAAGAAACAAGAAGTGAAAGCATTGAAGATCTTTACGGTTGATAACCTGAATATATATGGGAATCTTAAGGACGCGTGGCTGGGGACGACGTTGGATCATCCAACGACGTTTGATACGCTAGCACTTGATCGCGATTTAAAAGAGTTTGTTATGGAGGATTTGGAGAGGTTTATTAAGAGGAAGGAGTATTATAGGCAAGTTGGGAAAGCTTGGAAGAGAGGTTACTTGTTGTATGGTCCACCTGGGACTGGGAAAAGTAGTTTGGTTGCGGCTATGGCGAATTATTTGCATTTTGATATATATGATTTGGAACTTGGTGACTTGAGTTGTAATACTGAGTTGAGAAGGTTGTTGATTGCTATGCCAAATAGGTCTATTGTTGTTGTCGAGGATATTGATTGTACTGTTGAGTTTCAAGATCGTAGTTCACAGTCTAAATCTGGTGGATGCAACGACAAACAGGTTACACTATCAGGGCTGCTGAATTTTATTGATGGGCTTTGGTCAAGTTGTGGAGATGAGAGGATTATAGTGTTCACAACAAACCACAAGGAAAAGCTTGATCCAGCTTTGTTGCGCCCTGGTCGCATGGATGTTCATATCCACATGTCCTATTGTACTCCCTTTGGTTTTAGACAATTAGCTTTCCGTTACCTTGGAATTAAAGAACACACCCTGTTCAGAGAGATTGAGGAAACAATTCAGCAAACACTGCTAACTCCTGCTGAAGTGGCAGAGCAGCTTCTCAAGGGTAGTGAAACTGAAACTACTCTTAAAGGTCTGTCAGAATTTCTTACAAAGAAGAGAGTAAGTCAGGAACATGAGGCTGAAAAGAGAGAACAAGAAGAGCAGCATAGGGATCAGCTGGTAGATGACAGTGATTTTGGAGGAGAGAATGTTCAGCATATTGGGTCCTCAGAATTGTAA 1488 0.4234 MSSFFSSFTSSSSETNLATAKTILTTAASIAGTAMLIRSVANEFLPIDIRDIVFTGIKSAYCRFSTDVTMVIEEFEGLDNNQIYSAAETYLGTIVSPSTKRFRVSKSDHQQTFTLTVERDQLVTDYFNGVKLKWILFCRRAETHRNNGDLTFPVKSEVRSLELTFSRKHKDMVLKSYIPFILEKARLKKQEVKALKIFTVDNLNIYGNLKDAWLGTTLDHPTTFDTLALDRDLKEFVMEDLERFIKRKEYYRQVGKAWKRGYLLYGPPGTGKSSLVAAMANYLHFDIYDLELGDLSCNTELRRLLIAMPNRSIVVVEDIDCTVEFQDRSSQSKSGGCNDKQVTLSGLLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHIHMSYCTPFGFRQLAFRYLGIKEHTLFREIEETIQQTLLTPAEVAEQLLKGSETETTLKGLSEFLTKKRVSQEHEAEKREQEEQHRDQLVDDSDFGGENVQHIGSSEL 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02080 495 MobiDBLite consensus disorder prediction 456 480 - -
Mepo1g02080 495 SMART AAA_5 258 394 IPR003593 GO:0016887
Mepo1g02080 495 MobiDBLite consensus disorder prediction 456 495 - -
Mepo1g02080 495 PANTHER BCS1 AAA-TYPE ATPASE 26 459 - -
Mepo1g02080 495 Gene3D - 389 461 - -
Mepo1g02080 495 Pfam Domain associated at C-terminal with AAA 45 137 IPR025753 -
Mepo1g02080 495 CDD RecA-like_BCS1 237 390 - -
Mepo1g02080 495 ProSitePatterns AAA-protein family signature. 362 380 IPR003960 GO:0005524|GO:0016887
Mepo1g02080 495 Gene3D - 214 388 IPR027417 -
Mepo1g02080 495 Pfam ATPase family associated with various cellular activities (AAA) 263 391 IPR003959 GO:0005524|GO:0016887
Mepo1g02080 495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 210 435 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02080 Mepo-Chr1 21407931 21411220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02080 238 385 Miscellaneous Gene Families AT3G47060 30.675 1.05e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02080 - K08900 gmx:100788420 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02080 1 21407931 21411220 Mepo1g02080 1 21407931 21411220 ECH