Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02066 ATGGAGAACCTCCTTCTTCGTGCACCTTCAACTTCAACTTCAACTTCAACTTCAACTCCAACTCTTCCTCCCACATTTCAAATTCAACTCTCTTTCTTCGCCGTTGGATTCACCACCCGAACCACTTTCCTACGTAACCGAACCGAATCAACGCCACATCTCTGTTGCCGAACCAAACACTCTCCCTCCAAAGCATTCCCAACCAAACAAGAGTTTTTTCTTCTTCAGCAACAAGTAGAAGAAGATGATCAAGAAATTGACGATGACACTTCCTTCTTATCCCTCAGCGTGAAACCGGACCGGAATTTGGGCTTGCTCGATGATTATGAGACTGAGGAACTCGGTTATGATTGTGGTCCTAACCACAAAAGCGGATATGTGGCTTTACTTGGTAAACCAAATGTTGGGAAGAGTACACTGGCAAACCAAATTGTTGGCCAAAAGTTGTCAATAGTTACAGATAAACCTCAAACAACAAGGCATCGAGTTCTCTGTATATGTTCTGGCTCAGATTATCAGATGGTACTTTATGATACTCCCGGTGTTCTACAAGAACAAAAGCACAAGTTAGACTCAATGATGATGCAAAATGTTCGCAGCGCTACAGTTAACGCTGATTGTGTGTTGATTCTCGTTGATGCATGTAAAGCGCCTGAAAATATTGACGAAGTGTTGGAAGAAGGCATAGGAGGCCACAAAGATAAACTCCCCATTCTATTGATTATGAACAAGAAGGATCTTATCAAACCTGGTGAAGTTGCAAAGAAACTTGAGTGGTATACAAAATTTACTGATGTTGATGAGGTTATTCCAGTTAGTGCTAAGTACGGTCATGGGGTTGAAGATGTCAAGAACTGGATACTATCAAAGCTTCCTAACGGACCAGCTTATTTTCCAAAGGATATTGTGAGTGAACATCCAGAAAGATTTTTTGTAGCAGAAATTGTTAGAGAAAAGATATTTTTGCAATATCGAAATGAAATCCCCTATGTGTGTCAGGTGAATGTTATAAGCTATAAGGCTCGACCAAATGCTAAAGATTTTATACAGGTGGAGATTTTGGTTGAGAGAAACTCGCAGAAAATTATCATTATTGGAAAAGAAGGAAAAACTTTAAAACTGCTTGCAACAGCTGCGCGTCTTGACGTTGAAGATTTTCTACAGAAGAAAGTATTTCTAGAGATTAAAGTAAAAGTTAAAGAAAATTGGCGACAAGACGAAGGATTTCTTAAGCACTCTGGTTATGGAGGTCAAATAGGTATTCTATGA 1269 0.3964 MENLLLRAPSTSTSTSTSTPTLPPTFQIQLSFFAVGFTTRTTFLRNRTESTPHLCCRTKHSPSKAFPTKQEFFLLQQQVEEDDQEIDDDTSFLSLSVKPDRNLGLLDDYETEELGYDCGPNHKSGYVALLGKPNVGKSTLANQIVGQKLSIVTDKPQTTRHRVLCICSGSDYQMVLYDTPGVLQEQKHKLDSMMMQNVRSATVNADCVLILVDACKAPENIDEVLEEGIGGHKDKLPILLIMNKKDLIKPGEVAKKLEWYTKFTDVDEVIPVSAKYGHGVEDVKNWILSKLPNGPAYFPKDIVSEHPERFFVAEIVREKIFLQYRNEIPYVCQVNVISYKARPNAKDFIQVEILVERNSQKIIIIGKEGKTLKLLATAARLDVEDFLQKKVFLEIKVKVKENWRQDEGFLKHSGYGGQIGIL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02066 422 FunFam GTPase Era 304 418 - -
Mepo1g02066 422 CDD Era 122 291 IPR030388 GO:0005525
Mepo1g02066 422 NCBIfam GTPase Era 125 398 IPR005662 GO:0003723|GO:0005525
Mepo1g02066 422 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 300 415 IPR009019 GO:0003723
Mepo1g02066 422 MobiDBLite consensus disorder prediction 1 22 - -
Mepo1g02066 422 Pfam 50S ribosome-binding GTPase 127 244 IPR006073 GO:0005525
Mepo1g02066 422 Gene3D - 120 302 IPR027417 -
Mepo1g02066 422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 325 IPR027417 -
Mepo1g02066 422 FunFam GTPase Era 120 303 - -
Mepo1g02066 422 Gene3D - 304 419 IPR015946 -
Mepo1g02066 422 CDD KH-II_Era 313 399 - -
Mepo1g02066 422 Pfam KH domain 327 404 IPR004044 GO:0003723
Mepo1g02066 422 NCBIfam small GTP-binding protein domain 126 285 IPR005225 GO:0005525
Mepo1g02066 422 ProSiteProfiles Era-type guanine nucleotide-binding (G) domain profile. 123 293 IPR030388 GO:0005525
Mepo1g02066 422 ProSiteProfiles Type-2 KH domain profile. 324 401 IPR004044 GO:0003723
Mepo1g02066 422 Hamap GTPase Era [era]. 122 415 IPR005662 GO:0003723|GO:0005525
Mepo1g02066 422 PRINTS Transforming protein P21 ras signature 269 291 - -
Mepo1g02066 422 PRINTS Transforming protein P21 ras signature 125 146 - -
Mepo1g02066 422 PRINTS Transforming protein P21 ras signature 234 247 - -
Mepo1g02066 422 PANTHER GTPASE ERA 85 407 IPR005662 GO:0003723|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02066 Mepo-Chr1 21263561 21269351 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02066 K03595 - gmx:100795454 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02066 1 21263561 21269351 Mepo1g02066 1 21263561 21269351 ECH