Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01855 ATGAACACGGAAGACGCATCTCCGGCAGCCGCCATAACACGGTGGAAATTCGAAGCATCACGGCGGTATCAACACATTCTCGACAAATCAACGCCGCACGTCGGTCAACGATGGCTGGGTTGCCTTGTTGTTGCATTGGTTTACGTTCTTCGCGTTTACATCGTGCAAGGCTTCTACGTTGTTTCATACGGTCTTGGCATTTATATCTTGAACCTTTTGATTGGATTTCTTTCGCCTCAGGTTGATCCCGAGATTCTTGATGCTGATAATGGTCCTTCGCTTCCCACTTCTGGTTCTGATGAATTTCGTCCTTTTGTTCGTCGTCTTCCTGAGTTTAAGTTCTGGTACTCAATCACGAAGGCATTTTGCATTGCATTTGTGATGACTTTCTTTAGTGCATTTGATGTCCCCGTGTTCTGGCCAATACTCCTCTTCTACTGGGTGGTCCTATTCACGCTTACTATGAGGAGACAGATAGCTCACATGATCAAATACAAATATGTACCATTCTCGTTTGGAAAACAGCGCTATGATCGGAAGAGAGCATCAGCAGAAAGCACTAGCCTTTCGGACAACTGA 579 0.456 MNTEDASPAAAITRWKFEASRRYQHILDKSTPHVGQRWLGCLVVALVYVLRVYIVQGFYVVSYGLGIYILNLLIGFLSPQVDPEILDADNGPSLPTSGSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIAHMIKYKYVPFSFGKQRYDRKRASAESTSLSDN 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01855 192 Pfam Rer1 family 16 177 IPR004932 GO:0016020
Mepo1g01855 192 PIRSF AtER_Rer1p 1 188 IPR004932 GO:0016020
Mepo1g01855 192 PANTHER PROTEIN RER1 4 183 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01855 Mepo-Chr1 18511536 18514222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01855 2 185 Miscellaneous Gene Families AT4G39220 69.565 2.02e-96 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01855 - - ahf:112799570 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01855 1 18511536 18514222 Mepo1g01855 1 18511536 18514222 ECH
Mepo5g00692 5 6656134 6658642 Mepo1g01855 1 18511536 18514222 PCT