Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo1g01735 | ATGGCCACCACACCTTATCCACAACCACCTTCGCGTGCCTTTCTAGACACAATACAAGAAATCACACAAATCTATGGTTCTCTTCCACCTAGACCTTCTATAGAAGAAATAGAAGCTGCAACGTCAACGCTTGACACTCTTAACAACGTGGAACAAATCAAACTCGGAGAAATTGCAACACAAGAAAAACCAAAAGATGTTCCTGAAGATCTTTTCTTTGTTCTTCAACAACTCAAGAACACTATGGTCCTTTTTCAAAGTCATCAACAGAGAAAAGAAGCTCTTCACCTTCTTCAGCTTGATCAGATGTTTCAAACCTTTGGTGATCTTATTCAAAGAGCTTCTGAATTGGTTTCTCCTGATGAGGATACAAAGAAAAAGAAACTTCCCACTTTATATGAAGATGTGGTTAACTATGAAAAGGAGGAAGAGGAAGAGCCACAAAAGAGTGATGATTTTGAAGGTGAAAAGGGTTCCTTAGTGCACAAGCCGTTTTTGTTAACAGGAGATGGAAGCATTGAGAAATTGAGTCTTATGAAAGTGGCAACTGTAATTGAAAATTGTGCTAATAATAAGGACACAATCCTTGAGCTTAGAGGGAAATTAGTGGATCAAATGGAATGGTTACCACTATCAATTGGAAAATTATCTGATGTTACTCAAATAGACTTATCTGAAAACAGAATCATGGCTCTTCCAACAACAATTGTAGGTTTAAAGGCTTTAACAAAGCTTGATCTTCATTCAAACCAACTCATAAACCTTCCAAACTCATTTGGTGAGTTAATAAACCTTATTGAACTTGACCTACATGCCAATAAACTAAAATCACTTCCTGATACTTTTGGAAACTTGACAAATCTCATTGATCTTGATTTGAGTACAAATGATTTCACACATTTGCATGAGTCAATTGGGAGTTTAATCAGCTTAAAGAGATTAAATGTCGAGACAAATAAGCTTGAGGAACTACCTTTCACAATTGGAAATTGCACTTTACTAAGTGTGTTAAAGCTAGATTTCAATGAACTCAAGGCACTTCCTGAGGCAATTGGGAAGCTTGAATGTTTGGAGATTCTCACTGTTCACTATAATAGAATCAAGATGTTGCCTACAACAATTGGTAATCTAAGTAATTTGAAGGAACTTGATGTTAGTTTTAACGAGCTCGAATTCATACCAGAGAATTTCTGTTTCGCGGTTAGCTTGAAGAAACTAAACTTAGGAAAGAATTTTGCTGACTTAAGAGCATTGCCAAGATCAATTGGAAATCTTGAAATGCTTGAGGAGTTGGATATAAGTGGTGATCAAATCAAAGCTTTGCCTGATTCTTTTAGGTTTTTGTCTAAGTTGAGAGTTTTTCGGGCTGATGAGACTCCTCTTGAGGTACCACCAAAAGAAGTTGTCAAGTTGGGTGCTCAGGAAGTTGTGCAGTATATGACTGATTATGTCACCAAGAGGGATGCAAAACTCTTGCCACTAAAGACGAAAAAGAAGGGATTTTGGTCATGGTTTTGTTCCATATTTTGTCCTCAGCAGGAATGA | 1545 | 0.3696 | MATTPYPQPPSRAFLDTIQEITQIYGSLPPRPSIEEIEAATSTLDTLNNVEQIKLGEIATQEKPKDVPEDLFFVLQQLKNTMVLFQSHQQRKEALHLLQLDQMFQTFGDLIQRASELVSPDEDTKKKKLPTLYEDVVNYEKEEEEEPQKSDDFEGEKGSLVHKPFLLTGDGSIEKLSLMKVATVIENCANNKDTILELRGKLVDQMEWLPLSIGKLSDVTQIDLSENRIMALPTTIVGLKALTKLDLHSNQLINLPNSFGELINLIELDLHANKLKSLPDTFGNLTNLIDLDLSTNDFTHLHESIGSLISLKRLNVETNKLEELPFTIGNCTLLSVLKLDFNELKALPEAIGKLECLEILTVHYNRIKMLPTTIGNLSNLKELDVSFNELEFIPENFCFAVSLKKLNLGKNFADLRALPRSIGNLEMLEELDISGDQIKALPDSFRFLSKLRVFRADETPLEVPPKEVVKLGAQEVVQYMTDYVTKRDAKLLPLKTKKKGFWSWFCSIFCPQQE | 514 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo1g01735 | 514 | ProSiteProfiles | Leucine-rich repeat profile. | 264 | 286 | IPR001611 | GO:0005515 | |
| Mepo1g01735 | 514 | SUPERFAMILY | L domain-like | 194 | 457 | - | - | |
| Mepo1g01735 | 514 | FunFam | Plant intracellular Ras-group-related LRR protein 4 | 175 | 483 | - | - | |
| Mepo1g01735 | 514 | SMART | LRR_bac_2 | 425 | 444 | - | - | |
| Mepo1g01735 | 514 | SMART | LRR_bac_2 | 331 | 350 | - | - | |
| Mepo1g01735 | 514 | SMART | LRR_bac_2 | 308 | 327 | - | - | |
| Mepo1g01735 | 514 | SMART | LRR_bac_2 | 239 | 258 | - | - | |
| Mepo1g01735 | 514 | SMART | LRR_bac_2 | 377 | 396 | - | - | |
| Mepo1g01735 | 514 | SMART | LRR_bac_2 | 354 | 373 | - | - | |
| Mepo1g01735 | 514 | SMART | LRR_bac_2 | 262 | 281 | - | - | |
| Mepo1g01735 | 514 | ProSiteProfiles | Leucine-rich repeat profile. | 241 | 262 | IPR001611 | GO:0005515 | |
| Mepo1g01735 | 514 | Gene3D | Ribonuclease Inhibitor | 171 | 491 | IPR032675 | - | |
| Mepo1g01735 | 514 | Pfam | Leucine rich repeat | 357 | 411 | IPR001611 | GO:0005515 | |
| Mepo1g01735 | 514 | PANTHER | - | 340 | 472 | - | - | |
| Mepo1g01735 | 514 | SMART | LRR_typ_2 | 239 | 261 | IPR003591 | - | |
| Mepo1g01735 | 514 | SMART | LRR_typ_2 | 308 | 331 | IPR003591 | - | |
| Mepo1g01735 | 514 | SMART | LRR_typ_2 | 425 | 447 | IPR003591 | - | |
| Mepo1g01735 | 514 | SMART | LRR_typ_2 | 285 | 307 | IPR003591 | - | |
| Mepo1g01735 | 514 | SMART | LRR_typ_2 | 354 | 376 | IPR003591 | - | |
| Mepo1g01735 | 514 | SMART | LRR_typ_2 | 377 | 400 | IPR003591 | - | |
| Mepo1g01735 | 514 | SMART | LRR_typ_2 | 216 | 238 | IPR003591 | - | |
| Mepo1g01735 | 514 | SMART | LRR_typ_2 | 262 | 284 | IPR003591 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo1g01735 | Mepo-Chr1 | 17157516 | 17160091 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mepo1g01735 | 212 | 440 | Receptor kinase-like Gene Family | AT3G11080 | 32.068 | 4.51e-19 | 89.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo1g01735 | - | - | gmx:100798442 | 764.222 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mepo1g01735 | 1 | 17157516 | 17160091 | Mepo1g01735 | 1 | 17157516 | 17160091 | ECH |