Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01605 ATGGCTTCCAAAACTTGTTCCTCCCTTGCTATTTTCCTCACAATCAACGTTCTCTTCTTTACACTTGTCTCTTCTTGTGGAACTTGCGGCTCAGGTCCAAACCCAAACCCTAAGCCAAAGCATAAGCCAAGCCCAAACCATTCTGGAGGCTCGAGCCATTCGGGTGGATCTAGCCCCTATGGTGGCTCGACCCCTTCCGGAGGCTCAAGCCCCTCAGGTGGCTCTAGCCCTTCAGGGGGAAGTGGCACCAGCTCGTGCCCACGTGATGCACTCAAACTAGGTGTATGTGCCAATGTACTAAATGGACTGTTGAATGTGACTTTGGGTCAGCCACCAGTGACCCCATGCTGCACCCTCCTAAATGGTCTTGTTGATCTTGAAGCTGCTGTGTGTCTTTGCACTGCCCTTAGAGCTAACATTTTGGGGATCAATCTCAACCTTCCCATCTCACTTAGCTTGCTTCTCAATGTTTGCTCAAGGCAAGCACCACGTGATTTCCAATGCTCCTAA 510 0.5059 MASKTCSSLAIFLTINVLFFTLVSSCGTCGSGPNPNPKPKHKPSPNHSGGSSHSGGSSPYGGSTPSGGSSPSGGSSPSGGSGTSSCPRDALKLGVCANVLNGLLNVTLGQPPVTPCCTLLNGLVDLEAAVCLCTALRANILGINLNLPISLSLLLNVCSRQAPRDFQCS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01605 169 CDD HPS_like 86 168 IPR027923 -
Mepo1g01605 169 Pfam Hydrophobic seed protein 86 169 IPR027923 -
Mepo1g01605 169 SMART aai_6 86 168 IPR016140 -
Mepo1g01605 169 Gene3D - 84 169 IPR036312 -
Mepo1g01605 169 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Mepo1g01605 169 MobiDBLite consensus disorder prediction 45 85 - -
Mepo1g01605 169 MobiDBLite consensus disorder prediction 32 85 - -
Mepo1g01605 169 PANTHER - 7 168 - -
Mepo1g01605 169 FunFam pEARLI1-like lipid transfer protein 1 84 169 - -
Mepo1g01605 169 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 88 168 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01605 Mepo-Chr1 15823118 15824029 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01605 75 168 Acyl Lipid Metabolism Gene Families AT4G22490 42.553 1.60e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01605 - - gmx:100798361 185.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01605 1 15823118 15824029 Mepo1g01605 1 15823118 15824029 ECH