Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01484 ATGGTCGTTGAAGAAGGAGAGGCATTGGTGGCATGCAGTGACAAAAACATGAAAATTGGGGTGACAATATGGGACATGGAAACAGGAGAAAAGATGCTTCACATACCAACATGTGCTTCACCACCTTTAGGTATGTTATGCTTAAGAAATCGATTCCTCGTGGCATCACAGTTGAACAAACATGGGTCCGTAGGTGGAGGAGCCATTGTTGTCTGGCCCTTGAACAAGCCGCAACAACCACTTTTGAATTACACAGTGGAGGCCATTGGGCCACTTTCTTGCACAAAAGAAGGCATATACCTTGTGGGAGGTGCTTTATCTGGAACTGCTTATATCTGGAATGTGACTAGTGGAAAATTGTTGAAGACTTGGACAGCTCATTATAAGTCTATAGACCACATAATATTTTCTAATGATGATTCTCTTCTTATTTCTGGGTCAATTGATGGTCTTTTAGCTACAACTTGCAGTTACTTTTCAATTTTAATATCAAGCTCTCTTGATGGAACATGCAAGGTTTGGGACTTCATCACTGGAAGGCTTATGGAGACTCAAGGTTATCCTTTGGCAATAACTTGCATCACACTTCACCAAGGAGAACATATTTTGTTTTGTGGTGCAAAAAATGGAACAATAATTGTCAACATGCTTGATATTGGTTTGGAACAAGGTCCTAATTTCATGATTAGAGGAGACAAATCACTTGAATTGACAGGACACATGGGAGCCATTACTGCAATGGCGTCTAGTCGGACATGTCTAATATCTTCTTCTGAAGACTGCACAATCTGCATATGGGATGTGATCGGTTGGACAATCACTCGAAGATTCGATCTTCAAAAATGGAAAGTAACTAATCTCGTTGTGATACCTCGGTCTCCAGCATTCTCTGCATCGAATAACACGAGAGAGCTCAAACGATATATTGTTTCTCCATTGGATAAGTGTCCTCTGCAGATCAGCAGATACAAGGAAACTACCACTCTTCTTTCCTTGTGTCGCCTCTTCAAAGAAAGACAGACTTACATTGATTTAAGAAGCACCGGTTTATTGAGACAAACAATGTTTGCTTCACAGAAAACACACATGCCTATGGCCATGACCATAGAAATGAAAGTGGAAACAAATATAGAGAATCGTTCATGGACAATAAAGATGGCAAAACATGTGATGGTGATGAATAGAGAGTTGAAGTCGGGATTGTTGGACATGATACGTTGCAGATTGTTTTGTACAAACAAAATTCACTCTCAAAAAACAGAAGTTAAAGAAGAATACGTACAGAACAAGGTGAAACAATTAAAATCTGGAAAAGCAGGTGAAGCTCAATTAAACCTGAAACTTAAGAGTGAAGAGAAGGAGAAGAGAGGAGAACCGAAGCAGAGAGCCGCCACGTCGCCGCTGGAGGAGTCGGGAGAGATGGAGGCCAGAGACTGA 1437 0.4092 MVVEEGEALVACSDKNMKIGVTIWDMETGEKMLHIPTCASPPLGMLCLRNRFLVASQLNKHGSVGGGAIVVWPLNKPQQPLLNYTVEAIGPLSCTKEGIYLVGGALSGTAYIWNVTSGKLLKTWTAHYKSIDHIIFSNDDSLLISGSIDGLLATTCSYFSILISSSLDGTCKVWDFITGRLMETQGYPLAITCITLHQGEHILFCGAKNGTIIVNMLDIGLEQGPNFMIRGDKSLELTGHMGAITAMASSRTCLISSSEDCTICIWDVIGWTITRRFDLQKWKVTNLVVIPRSPAFSASNNTRELKRYIVSPLDKCPLQISRYKETTTLLSLCRLFKERQTYIDLRSTGLLRQTMFASQKTHMPMAMTIEMKVETNIENRSWTIKMAKHVMVMNRELKSGLLDMIRCRLFCTNKIHSQKTEVKEEYVQNKVKQLKSGKAGEAQLNLKLKSEEKEKRGEPKQRAATSPLEESGEMEARD 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01484 478 ProSiteProfiles Trp-Asp (WD) repeats profile. 160 184 IPR001680 GO:0005515
Mepo1g01484 478 Pfam WD domain, G-beta repeat 118 150 IPR001680 GO:0005515
Mepo1g01484 478 Pfam WD domain, G-beta repeat 234 267 IPR001680 GO:0005515
Mepo1g01484 478 MobiDBLite consensus disorder prediction 434 478 - -
Mepo1g01484 478 PANTHER WD-REPEAT PROTEIN 18 7 152 IPR045227 -
Mepo1g01484 478 ProSiteProfiles Trp-Asp (WD) repeats profile. 237 268 IPR001680 GO:0005515
Mepo1g01484 478 MobiDBLite consensus disorder prediction 445 463 - -
Mepo1g01484 478 SUPERFAMILY WD40 repeat-like 65 301 IPR036322 GO:0005515
Mepo1g01484 478 ProSitePatterns Trp-Asp (WD) repeats signature. 254 268 IPR019775 -
Mepo1g01484 478 Gene3D - 155 314 IPR015943 GO:0005515
Mepo1g01484 478 Gene3D - 2 154 IPR015943 GO:0005515
Mepo1g01484 478 SMART WD40_4 230 267 IPR001680 GO:0005515
Mepo1g01484 478 SMART WD40_4 178 216 IPR001680 GO:0005515
Mepo1g01484 478 SMART WD40_4 77 114 IPR001680 GO:0005515
Mepo1g01484 478 SMART WD40_4 117 175 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01484 Mepo-Chr1 14634383 14642847 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01484 K14829 - gmx:102662801 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01484 1 14634383 14642847 Mepo1g01484 1 14634383 14642847 ECH