Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01436 ATGAAAGCAATAACAACTTCCCTCAAATCCCTCAAATCATCATCATCATCACGCGCCACACAAGTTCTTGCAACTCGGTACCAGGTTTCTCATTTTTCTTCTTCCTCCTTTTCACTTCCTCTGTTGAATCGTTCACACAATTTATTACCTTTTCACAACAGTCATCAAAAACACTATTTTTCTTCAAAACCCAACTCAATTTTAGAGCGTGTTTACAACAACGATTGGTCTGAAGAGTTAGAGAAAGAGTTGGAAGAATGTCGTGAATCATTGACCCATGAAACTGTTGTTTATGTTTTGAAACGATTGGATAAAAACCCACTTAAAGTTTTCACCTTTTTCAATTGGGTTAGTGAGAAAGATTGGTTTATGGCAAGTTCTTCGGTTTATAGCTTGGTTCTTAGGGTTTTAGCTAGGAATAAGAATATGAAAGAGTTTTGGATTGTTCTTAGGGCTATGAAGGAAAATGGGTTTTATTTAGATGAAGAGACGCATTTGATGCTTTCGGCGGATTTGACTAAGGCGAAGATGAAGAGTGATGATGTTGAGTTTTCACGTTTCTATAAAGGGATGCTTGAGCAGGATGCAATGCTGAGTGTTGTCAAAAAGGTGGTTGGTATTATTTCAGGGTCTGATTGGGACGATGAGGTTGAGAATGAATTGCAGAAGGTTAAAATTCAACTTTCGGACAATTTCGTGATTAGGGTTATGAAAGAGCTTCGAAATAGTCCTTTAAAGGCTTATAAGTTTTTTCATTGGGTTGGAAAGCAATCTGGTTATCAACGGAATACAGTGACTTATAATGCAGTTGCTAGAGTTCTTCCTAGAATGGAGTCAATTGAGGAGTTTTGGAGTATTCTTGAGGAGATGAAGAGTGTCGGTCATGAATTGGATGTGGATACTTACATTAAGATATCGAGGCAGCTTCTAAATAATAGGATGATGGAGGACAGTGTCAAGCTTTATGAGCATATGATGGATAGTTCTTATAAGCCTACAGCTCCGGATTGCATTGTGCTTTTAAAGAGCCTATCTACAAAGGATAAGCCAGATTTGGATTTAGTTTTCAGGGTAACTAAGAAATTTGAGTCTACAGGATATACTCTTTCCAAGGCAGTCTATGATGGCATTCATAGGTCTTTGACAGGTGCTGGGAAATTTGATGAAGCTGAAAAGATTGTCGAGACCATGAAAAATGCTGGCTACGAACCGGATAACATCACATACAGTCAACTTATTTTCGGACTTTGTAAGACGAGGAGGTTCGAAGAAGCACTTAAGGTAATCGATCATATGCAAGCTATCAACCTTTGGGTTGATATCAAGACTTGGACCATCTTGATCCAAGGGTACTGTGATGCCGGCGAACTAGATGACGCGTTACTTAGTCTTTATAAGATGATGGAAAAGCCTTCCAGTCCAGATGCTGAATTGTTGGAAGTACTGGTTGATGGTTTTGTTAAGCAAAAGAGAATAGACGATGCATACAAGTTGCTTCTAGAGATAACTGGCAAGGGTCATTTAAGTCCATGGCAAGCTACATTCGAGAAGCTGATTGATGGTCTATTAGGAGTTAGAAAGTTCGAGGAGGCGCTCGACCTTCTTCGTTTGATGAAGTCTAAACAATACTCTCCATACCATGAACCATTTGCATCATATATTTCGAAGTTTGGGACCATGGAGGATGCTGCAGAATTCCTGAAGGCATTGAGTATAAAAAATTACCCATCTCATACAATTTACCTCCAAATTTTTGAATCCTTATTTCAAGAAGGTAGATTTTCAGAGGCCAAAGATCTATTGTACAGGTGTCCTCACCATATCCGGGAAAATAGTAAAATCTCCGAACTTTTTGGTTCATCCAAGAGTCAGGCGACTGATAGTCATATGGCTGCTACTTGA 1902 0.3896 MKAITTSLKSLKSSSSSRATQVLATRYQVSHFSSSSFSLPLLNRSHNLLPFHNSHQKHYFSSKPNSILERVYNNDWSEELEKELEECRESLTHETVVYVLKRLDKNPLKVFTFFNWVSEKDWFMASSSVYSLVLRVLARNKNMKEFWIVLRAMKENGFYLDEETHLMLSADLTKAKMKSDDVEFSRFYKGMLEQDAMLSVVKKVVGIISGSDWDDEVENELQKVKIQLSDNFVIRVMKELRNSPLKAYKFFHWVGKQSGYQRNTVTYNAVARVLPRMESIEEFWSILEEMKSVGHELDVDTYIKISRQLLNNRMMEDSVKLYEHMMDSSYKPTAPDCIVLLKSLSTKDKPDLDLVFRVTKKFESTGYTLSKAVYDGIHRSLTGAGKFDEAEKIVETMKNAGYEPDNITYSQLIFGLCKTRRFEEALKVIDHMQAINLWVDIKTWTILIQGYCDAGELDDALLSLYKMMEKPSSPDAELLEVLVDGFVKQKRIDDAYKLLLEITGKGHLSPWQATFEKLIDGLLGVRKFEEALDLLRLMKSKQYSPYHEPFASYISKFGTMEDAAEFLKALSIKNYPSHTIYLQIFESLFQEGRFSEAKDLLYRCPHHIRENSKISELFGSSKSQATDSHMAAT 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01436 633 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 298 332 IPR002885 -
Mepo1g01436 633 Gene3D Tetratricopeptide repeat domain 505 631 IPR011990 GO:0005515
Mepo1g01436 633 Gene3D Tetratricopeptide repeat domain 352 504 IPR011990 GO:0005515
Mepo1g01436 633 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 263 297 IPR002885 -
Mepo1g01436 633 Pfam Pentacotripeptide-repeat region of PRORP 351 472 IPR033443 -
Mepo1g01436 633 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 511 545 IPR002885 -
Mepo1g01436 633 PANTHER OS01G0970900 PROTEIN 71 620 IPR044578 GO:0008380
Mepo1g01436 633 SUPERFAMILY HCP-like 451 603 - -
Mepo1g01436 633 Gene3D Tetratricopeptide repeat domain 211 351 IPR011990 GO:0005515
Mepo1g01436 633 Gene3D Tetratricopeptide repeat domain 66 205 IPR011990 GO:0005515
Mepo1g01436 633 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 405 439 IPR002885 -
Mepo1g01436 633 Pfam PPR repeat 518 541 IPR002885 -
Mepo1g01436 633 Pfam PPR repeat 482 506 IPR002885 -
Mepo1g01436 633 Pfam PPR repeat 129 158 IPR002885 -
Mepo1g01436 633 NCBIfam pentatricopeptide repeat 407 433 IPR002885 -
Mepo1g01436 633 NCBIfam pentatricopeptide repeat 514 545 IPR002885 -
Mepo1g01436 633 NCBIfam pentatricopeptide repeat 443 475 IPR002885 -
Mepo1g01436 633 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 440 474 IPR002885 -
Mepo1g01436 633 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 126 160 IPR002885 -
Mepo1g01436 633 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 370 404 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01436 Mepo-Chr1 14163055 14164956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01436 309 602 Glycosyltransferase AT1G05670 24.497 1.92e-18 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01436 - - gmx:100815857 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01436 1 14163055 14164956 Mepo1g01436 1 14163055 14164956 ECH