Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo1g01430 | ATGGATCCCAACCCAAACCCAGGAACCTACCCAATCCTCAATTACGTCATGTCCCGTCTCCCATCATTCACCTCCAAATCCGATGTCAAACAACCACCACCCTCCGATCCATCCTCCTCATCTTCCTCAATCATCGGTCAAATGCCCAATCTCACAGACCCAAAACTCCTCGCCGCAATGACCCGCGCCATCTCCGACGTCTCCCAAGCCCGATCAGTCCTCACCCTCATCGGCGATCGTCCCACCCACGAAGAAGTCGACAATGCCAAGGCCAAACTCGTCGACCTTGAAGCACATTTGTTACGTCAATTGGAAGAGATTGTAGCCCTTCCTCGGCCTCCTGAGATTGACGAACAGAAGTGGGAAATTCATGTTACGGAAAGAGAAACGAAATGTAGAGAAAATGTTGAGAATGAGAAGCGTGGTTATAAAGAGCTTTTGCAAAAAGATGAGATGCATGAAGCTTATGAGAAGCTTCTTAAGGATGCGGAGATTAGGCTTGTGAAAATTTATGAGGATGATGGTGGAGATGGTAATGATAATGATAATGATGTGGTTGAAGATGATGAATGTAAAGAACGTGTTATGAAGATATTGCAGGAGCCGCGTGAGAAAGATGGTCAGCGTGTTGATCTTTCCGGGCAACGCTTGACGATGTTGCCGGAGGCGGTTTGTCAAGTTTCTTCCTTGGTTGTGCTTAACCTCTCCACAAATAAGCTTTCGGTGATTCCTGACACAATATCGGGATTGCTAAATCTAGAGGATCTTAATATCTCTTCAAATATTTTGAAGTCACTTCCAGATTCAATTGGCTTTTTACAAAAGTTGAAAATTCTCAATGTGTCTGGAAATAAGTTGAGTGCTCTTCCTGATTCCATCGGTCAGTGCAGATCGTTGGTGGAGCTGGATGCCAGCTTTAACAGTCTGTCATATTTGCCAACAAACATTGGATTTGAATTACAGAATTTACAGAAGCTCTTGATTGGTTTAAACAAGATACGATCCCTTCCCTCATCTATTTGCGAGATGAAGTCATTGCGCTATCTAGATGCGCACTTTAATGAACTACATGGGCTTCCTATTGCAATTGGGAAATTGACTAGTCTTGAATTTCTAAACCTGAGTAGTAACTTCAGTGATCTTCAAGAAATACCAGAGACATTTGGTGATCTGAGTAGCCTCAAGGAATTGGATCTTAGCAACAATCAAATTCACGCACTTCCTGATACATTTGGCCGCCTTGATAGTTTAATCAAGCTAAACTTAGAGCAGAACCCTATTGAATTGCCACCTATGGAGATTGTAAATGAAGGTGTCCAAGCCATCAAGTCTTACATGGCCAAGAGGTGGATTGATATATTGGCAGAGGAAGAGAGGAAAAAGACACATGAATCGGAAGAACAAGGACAGAGTGGTTGGTTAACACGAAGTATCTCCATGTTGAAGAACGTTCCTGGAAATGTAACTGAGTATATCGGAAGTGCCGTCTCCCCCAAAACTCCCAAGACTCCTAGAAGTAATTTTCTTGATCAGGAACTATAA | 1542 | 0.4319 | MDPNPNPGTYPILNYVMSRLPSFTSKSDVKQPPPSDPSSSSSSIIGQMPNLTDPKLLAAMTRAISDVSQARSVLTLIGDRPTHEEVDNAKAKLVDLEAHLLRQLEEIVALPRPPEIDEQKWEIHVTERETKCRENVENEKRGYKELLQKDEMHEAYEKLLKDAEIRLVKIYEDDGGDGNDNDNDVVEDDECKERVMKILQEPREKDGQRVDLSGQRLTMLPEAVCQVSSLVVLNLSTNKLSVIPDTISGLLNLEDLNISSNILKSLPDSIGFLQKLKILNVSGNKLSALPDSIGQCRSLVELDASFNSLSYLPTNIGFELQNLQKLLIGLNKIRSLPSSICEMKSLRYLDAHFNELHGLPIAIGKLTSLEFLNLSSNFSDLQEIPETFGDLSSLKELDLSNNQIHALPDTFGRLDSLIKLNLEQNPIELPPMEIVNEGVQAIKSYMAKRWIDILAEEERKKTHESEEQGQSGWLTRSISMLKNVPGNVTEYIGSAVSPKTPKTPRSNFLDQEL | 513 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo1g01430 | 513 | ProSiteProfiles | Leucine-rich repeat profile. | 252 | 273 | IPR001611 | GO:0005515 | |
| Mepo1g01430 | 513 | SMART | LRR_typ_2 | 320 | 343 | IPR003591 | - | |
| Mepo1g01430 | 513 | SMART | LRR_typ_2 | 297 | 319 | IPR003591 | - | |
| Mepo1g01430 | 513 | SMART | LRR_typ_2 | 366 | 390 | IPR003591 | - | |
| Mepo1g01430 | 513 | SMART | LRR_typ_2 | 250 | 271 | IPR003591 | - | |
| Mepo1g01430 | 513 | SMART | LRR_typ_2 | 391 | 414 | IPR003591 | - | |
| Mepo1g01430 | 513 | SMART | LRR_typ_2 | 227 | 249 | IPR003591 | - | |
| Mepo1g01430 | 513 | SMART | LRR_typ_2 | 273 | 296 | IPR003591 | - | |
| Mepo1g01430 | 513 | ProSiteProfiles | Leucine-rich repeat profile. | 393 | 414 | IPR001611 | GO:0005515 | |
| Mepo1g01430 | 513 | Pfam | Leucine rich repeat | 385 | 427 | IPR001611 | GO:0005515 | |
| Mepo1g01430 | 513 | Pfam | Leucine rich repeat | 252 | 309 | IPR001611 | GO:0005515 | |
| Mepo1g01430 | 513 | SUPERFAMILY | L domain-like | 208 | 427 | - | - | |
| Mepo1g01430 | 513 | MobiDBLite | consensus disorder prediction | 494 | 513 | - | - | |
| Mepo1g01430 | 513 | MobiDBLite | consensus disorder prediction | 23 | 49 | - | - | |
| Mepo1g01430 | 513 | Gene3D | Ribonuclease Inhibitor | 312 | 448 | IPR032675 | - | |
| Mepo1g01430 | 513 | Gene3D | Ribonuclease Inhibitor | 115 | 311 | IPR032675 | - | |
| Mepo1g01430 | 513 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING | 275 | 436 | - | - | |
| Mepo1g01430 | 513 | FunFam | Plant intracellular Ras-group-related LRR protein 9 | 128 | 311 | - | - | |
| Mepo1g01430 | 513 | Coils | Coil | 86 | 106 | - | - | |
| Mepo1g01430 | 513 | SMART | LRR_bac_2 | 227 | 246 | - | - | |
| Mepo1g01430 | 513 | SMART | LRR_bac_2 | 343 | 362 | - | - | |
| Mepo1g01430 | 513 | SMART | LRR_bac_2 | 250 | 269 | - | - | |
| Mepo1g01430 | 513 | SMART | LRR_bac_2 | 391 | 410 | - | - | |
| Mepo1g01430 | 513 | SMART | LRR_bac_2 | 296 | 315 | - | - | |
| Mepo1g01430 | 513 | SMART | LRR_bac_2 | 366 | 387 | - | - | |
| Mepo1g01430 | 513 | SMART | LRR_bac_2 | 273 | 292 | - | - | |
| Mepo1g01430 | 513 | SMART | LRR_bac_2 | 320 | 339 | - | - | |
| Mepo1g01430 | 513 | ProSiteProfiles | Leucine-rich repeat profile. | 275 | 296 | IPR001611 | GO:0005515 | |
| Mepo1g01430 | 513 | FunFam | Plant intracellular Ras-group-related LRR protein 2 | 315 | 490 | - | - | |
| Mepo1g01430 | 513 | ProSiteProfiles | Leucine-rich repeat profile. | 229 | 251 | IPR001611 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo1g01430 | Mepo-Chr1 | 14110678 | 14114719 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mepo1g01430 | 210 | 451 | Receptor kinase-like Gene Family | AT5G62230 | 30.980 | 9.47e-12 | 65.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo1g01430 | - | - | gmx:100782818 | 662.144 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mepo1g01430 | 1 | 14110678 | 14114719 | Mepo1g01430 | 1 | 14110678 | 14114719 | ECH |