Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01385 ATGCCAGGTATTGTTCCAATTGAAGAAAATAAAATGAATGAACTTGAGAACCCTTCACCCTCTAAGAACATCTATAATAAAATAAATTCACCAAGAATACCATTGAGCCCACAAACACCTAAAAGTGTTGATAGGTTTCATGAAATTGTACATGATGCAAGACGTTCGCGTCGAACACGCTCAAGTCAAAGCTTTGGATCAGATAGTGATTGGTCTTTAACTGATTCAGAATTTAGCCATATTAGTGGAGAACAAATGAGGAAGATGGAGATAGTGAAAGAGGAAATGGTGAAAAAGATAGTGAGGGATTCTGGCAGTGAAACACCATCAATATCAAGAGCTAAGGGAAAAAATCCTCCTTCAAAACCTCCTGTTGAAAGGAAGAATGGAAACAATCCTTTGAGAAAACAAAGTACAACAGTTACTAATCGTGTGGTAAAACCTAAGAATGCTTCTATTGGAAGATCAAGGTCACAAAGTCGAGTTGACGATTCTAAGGAATCAACATTTGATAATCCTGAGCTTGGACCATTTTTACTAAAGAAAGCAAGAGATTTGATTTCATTAGGAGAGAATCCGAGGAAAGCTCTCGAGTTATCGCTTCAAGCGATGAAATTGTTTGAGAAATCTGCAAATGGGAAACCAAGTTTGGATCTGGTTATGTGTTTACATGTTACTGCAGCTATATATTGCAGTTTGGGTCATTATAATGAGGCAATTCCAATTTTAGAGCAGTCAATAGAAATTCCCGTCGTTGAGGAAGGCGAGCAACATGCCATTGCGAAATTCGCTAGTCACATGCAACTTGGAGACACTTATGCTATGCTAGGCCAGCTGGAGAATTCAATTATGTGTTACAACAATGGGTTGGAAGTACAAAGAAAGGTTTTGGGAGTAACTGATCCAAGAGTTGGTGAAACTTGTAGGTATGTAGCAGAAGCTAACTTTCAAGCATTGCAATTTGATGAGGCAGAGAGGCTGTGTCAAATTGCTCTTGATATTCATAGAGAAAATGGTTCACCCTCTTCTCTTGAAGAGGCGGCAGATAGAAGGTTGATGGGTCTTATATGTGAAACTAATGGAAATCATGAAGCAGCATTGGAGCACCTTGTTTTAGCAAGCATGACAATGGTATCAAATGGCCAAGAAGTGGAAGTGGCGTCTGTTGATTGCAGCATTGGAGACACGACATGGAAGACAAGGGAATCAAGATCGTATTGTGAAAATGCACTTAAAATCTATGAAAATCCCATGCCTGGTGTCCCTTCTGAGGAGATTGCTAGTGGTTTTGTGAATGTTGCAGCTATTTATGAGTCAATGAATGAGCTTGAACAAGCACTCGAGTTACTGCACAAGGCACTAGAGATACATAATGATGCCCCTGGCCAACAGAACACAATTGCAGGAATTGAAGCTCAAATAGGGGTCATATACTATGTGTTGGGAAGCCAGACTGAATCTTACAATGCTTTCAAGAATGCTGTCTCAAAGCTTCGAGCTACGGGAGAGAAAAAATCGGCTTTCTTTGGTTTTGTTCTTAATCAAATGGGCCTTTGTTGTGTGCAACTTAATGCCTTGAGCGAGGCTGTCAAATTATTCGAAGAAGCGAAGATTGTTTTGGAACAAGAGTATGGTCCTTATCACCCTGAAACTCTTGGAGTATATAGCAATCTTGCTGGCACATATGATGCAATTGGCAGGGTGCACGATGCAATTGATATTATGGAATACATTGTAGAAGTGAGGGAGGAAAAACTTGGGACAGCACACTTTGATGTTGTTGATGAGAAGAGAAGGTTGGATGAGTTATTGAAGGAAACAGGCAGAGTTCGGAAGAGAAAAACCAAGTCACTTGAGATTCTTCTTGATGTCAATGCTTGTACTATAAACAACCTTGTCAATGAGGACTAA 1911 0.3982 MPGIVPIEENKMNELENPSPSKNIYNKINSPRIPLSPQTPKSVDRFHEIVHDARRSRRTRSSQSFGSDSDWSLTDSEFSHISGEQMRKMEIVKEEMVKKIVRDSGSETPSISRAKGKNPPSKPPVERKNGNNPLRKQSTTVTNRVVKPKNASIGRSRSQSRVDDSKESTFDNPELGPFLLKKARDLISLGENPRKALELSLQAMKLFEKSANGKPSLDLVMCLHVTAAIYCSLGHYNEAIPILEQSIEIPVVEEGEQHAIAKFASHMQLGDTYAMLGQLENSIMCYNNGLEVQRKVLGVTDPRVGETCRYVAEANFQALQFDEAERLCQIALDIHRENGSPSSLEEAADRRLMGLICETNGNHEAALEHLVLASMTMVSNGQEVEVASVDCSIGDTTWKTRESRSYCENALKIYENPMPGVPSEEIASGFVNVAAIYESMNELEQALELLHKALEIHNDAPGQQNTIAGIEAQIGVIYYVLGSQTESYNAFKNAVSKLRATGEKKSAFFGFVLNQMGLCCVQLNALSEAVKLFEEAKIVLEQEYGPYHPETLGVYSNLAGTYDAIGRVHDAIDIMEYIVEVREEKLGTAHFDVVDEKRRLDELLKETGRVRKRKTKSLEILLDVNACTINNLVNED 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01385 636 MobiDBLite consensus disorder prediction 131 158 - -
Mepo1g01385 636 Coils Coil 523 543 - -
Mepo1g01385 636 ProSiteProfiles TPR repeat profile. 427 460 IPR019734 GO:0005515
Mepo1g01385 636 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 36 396 - -
Mepo1g01385 636 SUPERFAMILY TPR-like 201 592 IPR011990 GO:0005515
Mepo1g01385 636 Pfam MalT-like TPR region 192 380 IPR041617 -
Mepo1g01385 636 Gene3D Tetratricopeptide repeat domain 472 632 IPR011990 GO:0005515
Mepo1g01385 636 Gene3D Tetratricopeptide repeat domain 179 386 IPR011990 GO:0005515
Mepo1g01385 636 Pfam Tetratricopeptide repeat 513 580 - -
Mepo1g01385 636 MobiDBLite consensus disorder prediction 101 170 - -
Mepo1g01385 636 SUPERFAMILY TPR-like 350 461 IPR011990 GO:0005515
Mepo1g01385 636 MobiDBLite consensus disorder prediction 1 75 - -
Mepo1g01385 636 MobiDBLite consensus disorder prediction 44 61 - -
Mepo1g01385 636 MobiDBLite consensus disorder prediction 14 37 - -
Mepo1g01385 636 Pfam Tetratricopeptide repeat 431 461 IPR019734 GO:0005515
Mepo1g01385 636 Coils Coil 440 460 - -
Mepo1g01385 636 Gene3D Tetratricopeptide repeat domain 387 471 IPR011990 GO:0005515
Mepo1g01385 636 SMART tpr_5 510 543 IPR019734 GO:0005515
Mepo1g01385 636 SMART tpr_5 468 501 IPR019734 GO:0005515
Mepo1g01385 636 SMART tpr_5 305 338 IPR019734 GO:0005515
Mepo1g01385 636 SMART tpr_5 427 460 IPR019734 GO:0005515
Mepo1g01385 636 SMART tpr_5 220 253 IPR019734 GO:0005515
Mepo1g01385 636 SMART tpr_5 263 296 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01385 Mepo-Chr1 13690567 13693372 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01385 - - psat:127073916 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01385 1 13690567 13693372 Mepo3g05857 3 72912358 72915859 ECH
Mepo1g01385 1 13690567 13693372 Mepo1g01385 1 13690567 13693372 ECH
Mepo1g01385 1 13690567 13693372 Mepo3g05857 3 72912358 72915859 PCT