Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01357 ATGGAATTGAAACACACACACACACGAAGCAGATCTTACCTATACGACCTGTTCTGTTCTGTTCTGCTCTTTGCTCTTTCCTCTTTCCTCTTTCAACAACATTTTCAAACCAAGTCCGCGAATCAATCCTCTTTCTACATCCAAAATCCAATGATTCCTCGTCGTTACTATTTGACATGTCTCCTTATCTTCCTTCTCGTACTTTCCACCTTCTCCTTCTCTCACTCTCAACCCCATTGGTCTTCCAAGAAAAAACGCCTCAGTGAAAAAGTTCGCAATATGTTTCACCATGCCTATGACAACTATATGACTCATGCATTTCCGCACGATGAGCTAAAACCTCTCACAAAAACTTTCACCGATTCCCTAAGTGAGCTGGGAAATTTGAAGCTTGAACGTTTGCCGCAAGACTACAATGGTTCTGCTCTTTCGCTAATTGAATCGCTGTCTAGCCTTGTGATTATGGGCAACAATACCGAATTCGAGAAGGGAGTGCGCTGGCTTTCAGAAAATCTAAAATTTGACGTTGATGCCCGCATTAATCTTTTTGAGTGCAACATTAGAGTTCTTGGAGGACTTGTCTCTGCTCATTTACTGGCATCTGATTCTTCAAAGAAGTTGCTACAAGGATCTTACAAGAATGAGCTACTAGGCCTGGCTGAAGATTTAGGGAAACGTTTTCTACCAGCGTTCAATACGCCTACTGGATTACCATATGCATGGATAAACTTAAAGTATGGAGTAATGGAGAATGAGACTACAGAAACAAGCACTTCGGGGTGTGGTTCATTGATTCTTGAAATGGGTGCTTTATCAAAACTGACTGGTGACCCCATATATGAATCAGTAGCTTTACGAGCTCTCCATAAGCTATGGAGTATGCAGAGCTTACTAAAATTATTTGGAACCACACTTGATGTCTCAACTGGCCAATGGATTGAACATTCTTCAGGAATTGGAGCTGATTCCTTCTATGAATATCTACTTAAAGCTCATATCCTTTTCGGAAAGGAGGACTATTGGAGAATGTTTCATTCTGCTTATGTTGCAGTGCAGAAGCATTTCAGACACGGTCCCTGGTACCACGAAGCTGATATGAGGACAGGAAGAGCAACTTATTGGCAGCTTACAAGTCTTCAAGCATTTTGGCCTGGCCTACAGGTTCTTATTGGGGATATATCTGCTGCTAATTCATCTCACCGTGAGTTCTTCTATGTGTGGAAGAAATTTGGAGTGCTGCCAGAGAGATGCTTCATCCTACTGAAAAATATTATCCGTTACGCCCTGAGTTTGCTGAGTCAACATTTTACTTATATCAAGCTACTAAAGATCCATGGTATATTGAAGTCGGCGAATTAA 1359 0.4143 MELKHTHTRSRSYLYDLFCSVLLFALSSFLFQQHFQTKSANQSSFYIQNPMIPRRYYLTCLLIFLLVLSTFSFSHSQPHWSSKKKRLSEKVRNMFHHAYDNYMTHAFPHDELKPLTKTFTDSLSELGNLKLERLPQDYNGSALSLIESLSSLVIMGNNTEFEKGVRWLSENLKFDVDARINLFECNIRVLGGLVSAHLLASDSSKKLLQGSYKNELLGLAEDLGKRFLPAFNTPTGLPYAWINLKYGVMENETTETSTSGCGSLILEMGALSKLTGDPIYESVALRALHKLWSMQSLLKLFGTTLDVSTGQWIEHSSGIGADSFYEYLLKAHILFGKEDYWRMFHSAYVAVQKHFRHGPWYHEADMRTGRATYWQLTSLQAFWPGLQVLIGDISAANSSHREFFYVWKKFGVLPERCFILLKNIIRYALSLLSQHFTYIKLLKIHGILKSAN 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01357 452 PRINTS Glycosyl hydrolase family 47 signature 318 335 IPR001382 GO:0004571|GO:0005509|GO:0016020
Mepo1g01357 452 PRINTS Glycosyl hydrolase family 47 signature 375 391 IPR001382 GO:0004571|GO:0005509|GO:0016020
Mepo1g01357 452 PRINTS Glycosyl hydrolase family 47 signature 179 197 IPR001382 GO:0004571|GO:0005509|GO:0016020
Mepo1g01357 452 PRINTS Glycosyl hydrolase family 47 signature 94 114 IPR001382 GO:0004571|GO:0005509|GO:0016020
Mepo1g01357 452 PRINTS Glycosyl hydrolase family 47 signature 229 248 IPR001382 GO:0004571|GO:0005509|GO:0016020
Mepo1g01357 452 Gene3D - 77 429 IPR012341 GO:0005975
Mepo1g01357 452 PANTHER ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 59 416 IPR044674 GO:0004571|GO:1904380|GO:1904382
Mepo1g01357 452 SUPERFAMILY Seven-hairpin glycosidases 86 423 IPR036026 GO:0004571|GO:0005509|GO:0016020
Mepo1g01357 452 Pfam Glycosyl hydrolase family 47 94 418 IPR001382 GO:0004571|GO:0005509|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01357 Mepo-Chr1 13433522 13438482 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01357 50 425 Glycoside Hydrolase AT1G27520 76.720 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01357 K10084 - gmx:100793674 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01357 1 13433522 13438482 Mepo1g01357 1 13433522 13438482 ECH