Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01339 ATGGTTTCCGATTCAATCGCCGCCGTTCCGATTCCTTCCGCCGCTAACACCAAGAACCCTGGCAAAAAGAAGAGGACCAATAGGTCCGCGAAATTGAAGCAGTATAAGATTGATGCGCGTCGTGAACAATGGCTATCTCAAGGTGCGGTGAAGAAGGGTTGCAAGGATGGATTGGACGATGATGTCCACGTGCCGTCGTCACCAGTGGGGAAACAGAGCAAACGTGAATTGGAGAAAGTGGGGACGAGGCGTAGAGGTGGAGAGAATGATGTGTTGATCCATCATGACAGTGATTCGGAGTCGCCGTCAAACAGTCCTATCAGTCCTAATAGTAGTGTGTTGTGTGGTAATGATTCCGGGACGAATTTCACTGGCAGTAGCAGTGGTGGAAGCAGTAGCAGTAGTAGTTCTAGTAGTGGTGGGTGTTTCTCCGGAAACATTACGGAAGAGGAAGAAGATGATGAAGAAGAAGTAGAACAAGAGGAGGAGGATGATGGATGCTTGGATGATTGGGAGGCTGTGGCAGATGCTTTAGCCGCCGATGAGAAGCATCGAGCCTCTTCACAGGATGAACCCGTTGTGGAAACGGATTCATCTTGTGAAGTGACTGATGGTTTGAGTTTAGGATGTTTGGATTCCAAACCGGGGAGTGGTGGAACGGTTCCTAGGGCTTCCAGTAATGGTAAAGCTTGGAGGGCTGATGATGCTTTTCGCCCTCAGACTTTGCCCAATCTGTCAAAGCAGCATAGTATGCCGAATCCACGTTTTGGAGGAGGGGTTCCCTGGTCTCGCATGTCTGTGCCATCCAATTGTCCAATTTGCTGTGAGGATCTCGATTTAACGGACACGAGTTTTCTTCCATGCAATTGTGGTTTTCGGCTTTGTCTCTTTTGCCACAAGAGGATTCTTGAGCAGGATGCTCGTTGTCCTGGGTGCAGGAAGCAATATGAGTCTGAACCTATTGAGACTGAAGCAAGTGTGCATGGAGGTAGCCTTACTCTTCGGCTGGCTCGTTCTGTTAGCATGATCGAAAGGTCTTGA 1041 0.4909 MVSDSIAAVPIPSAANTKNPGKKKRTNRSAKLKQYKIDARREQWLSQGAVKKGCKDGLDDDVHVPSSPVGKQSKRELEKVGTRRRGGENDVLIHHDSDSESPSNSPISPNSSVLCGNDSGTNFTGSSSGGSSSSSSSSSGGCFSGNITEEEEDDEEEVEQEEEDDGCLDDWEAVADALAADEKHRASSQDEPVVETDSSCEVTDGLSLGCLDSKPGSGGTVPRASSNGKAWRADDAFRPQTLPNLSKQHSMPNPRFGGGVPWSRMSVPSNCPICCEDLDLTDTSFLPCNCGFRLCLFCHKRILEQDARCPGCRKQYESEPIETEASVHGGSLTLRLARSVSMIERS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01339 346 Pfam RING/Ubox like zinc-binding domain 271 317 - -
Mepo1g01339 346 ProSiteProfiles Zinc finger RING-type profile. 271 313 IPR001841 -
Mepo1g01339 346 SUPERFAMILY RING/U-box 269 321 - -
Mepo1g01339 346 MobiDBLite consensus disorder prediction 211 233 - -
Mepo1g01339 346 MobiDBLite consensus disorder prediction 147 171 - -
Mepo1g01339 346 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 267 340 IPR039780 GO:0004842|GO:0030014
Mepo1g01339 346 Coils Coil 144 164 - -
Mepo1g01339 346 MobiDBLite consensus disorder prediction 72 97 - -
Mepo1g01339 346 MobiDBLite consensus disorder prediction 180 199 - -
Mepo1g01339 346 FunFam RING/U-box superfamily protein 264 329 - -
Mepo1g01339 346 MobiDBLite consensus disorder prediction 1 173 - -
Mepo1g01339 346 MobiDBLite consensus disorder prediction 98 145 - -
Mepo1g01339 346 CDD mRING-HC-C4C4_CNOT4 271 314 IPR039515 -
Mepo1g01339 346 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 329 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01339 Mepo-Chr1 13231107 13232849 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01339 - - var:108330419 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01339 1 13231107 13232849 Mepo1g01339 1 13231107 13232849 ECH