Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01259 ATGGCAGCAGCAGCATCAGCTACTTTTACTATTGGAACCACCCGAACAGGGAGGTCACTTCCTCAGTCAAGTCCTTTTGGTTTGAAATTCAATTCCCAGGTTAATTTCAACACTTTCTCTGGCCTCAAAGCCATGCCGTCTCTCAGATGTGACTCTGAATCATCTTTCTCCGGCAAAGAAACTTGTGCTGCTCTGCGTGCAACTTTTGCACCCAGAGCTCAAAAGGAAAACCGAATCATCACCCGCAACTTGCAGCCTCAGGCATCCTACAAAGTAGCGGTTCTCGGTGCTGCAGGAGGGATTGGTCAGCCACTGGCACTTCTCATCAAGATGTCCCCTTTGGTTTCCGACCTGCATCTCTATGATATCGCAAATGTTAAGGGAGTTGCTGCTGATATCAGTCATTGCAACACTCCTTCAAAAGTTTTGGATTTCACAGGTGCTTCTGAGTTAGCAAATTGTTTGAAAGGAGTGGATGTTGTTGTTATCCCTGCTGGTGTTCCTAGGAAGCCTGGCATGACTCGTGACGACCTTTTCAACATCAATGCTGGTATAGTCAGGGACTTGGTCACGGCCGTTGCAGATAATTGCCCCAATGCTTTTATTCATATTATCAGTAATCCAGTGAACTCTACAGTTCCTATTGCCGCCGAAATTCTAAAACAGAAGGGTGTCTATGATCCTAAGAAGCTCTTTGGTGTTTCTACCCTTGATGTTGTGAGGGCAAACACATTTGTTGCTCAGAGGAAGAACCTGAGGTTGATTGATGTGGATGTTCCAGTTGTTGGAGGTCATGCCGGGATTACAATTCTTCCTCTCTTGTCAAAGACAAGACCCTCAGTGAGTTTCACTGATGAAGAAATTGAGGAGCTAACTGTCAGGATTCAAAATGCTGGAACTGAAGTTGTTGAGGCAAAGGCTGGTGCAGGGTCTGCTACTTTGTCAATGGCTTATGCAGCAGCAAGATTTGTTGAATCATCTCTTCGTGCACTTGACGGAGATGCTGATGTGTATGAGTGCTCTTTTGTACAGTCAGATCTGACCGACCTTCCGTTTTTTGCTTCAAGAGTGAAGATTGGTAGGAAAGGTGTCGAGGCTTTAATTCCAACTGATCTCCAAGGATTGAGTGAGTATGAGCAGAAGGCTTTGGAAGCACTTAAGCCAGAACTTAAGGCCAGCATCGAGAAGGGGGTTGCTTTTGCTCAAAAGCAAACTGTTGCTGCTTAG 1227 0.4564 MAAAASATFTIGTTRTGRSLPQSSPFGLKFNSQVNFNTFSGLKAMPSLRCDSESSFSGKETCAALRATFAPRAQKENRIITRNLQPQASYKVAVLGAAGGIGQPLALLIKMSPLVSDLHLYDIANVKGVAADISHCNTPSKVLDFTGASELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINAGIVRDLVTAVADNCPNAFIHIISNPVNSTVPIAAEILKQKGVYDPKKLFGVSTLDVVRANTFVAQRKNLRLIDVDVPVVGGHAGITILPLLSKTRPSVSFTDEEIEELTVRIQNAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALDGDADVYECSFVQSDLTDLPFFASRVKIGRKGVEALIPTDLQGLSEYEQKALEALKPELKASIEKGVAFAQKQTVAA 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01259 408 FunFam Malate dehydrogenase 235 403 - -
Mepo1g01259 408 Gene3D - 88 234 - -
Mepo1g01259 408 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 86 234 IPR036291 -
Mepo1g01259 408 CDD MDH_glyoxysomal_mitochondrial 90 401 IPR010097 GO:0006099|GO:0030060
Mepo1g01259 408 Pfam lactate/malate dehydrogenase, NAD binding domain 91 233 IPR001236 GO:0016491
Mepo1g01259 408 Gene3D - 235 406 IPR015955 GO:0003824|GO:0016616
Mepo1g01259 408 SUPERFAMILY LDH C-terminal domain-like 235 401 IPR015955 GO:0003824|GO:0016616
Mepo1g01259 408 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 236 400 IPR022383 GO:0016616
Mepo1g01259 408 NCBIfam malate dehydrogenase 91 402 IPR010097 GO:0006099|GO:0030060
Mepo1g01259 408 PANTHER MALATE AND LACTATE DEHYDROGENASE 79 404 - -
Mepo1g01259 408 FunFam Malate dehydrogenase 88 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01259 Mepo-Chr1 12346616 12349226 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01259 K00026 - gmx:100783173 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01259 1 12346616 12349226 Mepo1g01259 1 12346616 12349226 ECH