Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01207 ATGGCAGAAACCCGAAGAACTTCATCATCTTCAACAACCGTTCTCGATAGTTTAGGCGAAGAAATCGTTAGAATTATCACTCCCGTTTCAATCTGCATGTTCCTCGTTGTAATCTTAGTCTCAATTCTCAACACAAACGATTCTCCAACAATCTCCACCATAGCCAACATAGCATACGACGAAACAACCTCAGATTCTTCCTGGGACAAATTCCTAGGCGCACTTTTAAACTCTCTCTCCTTCGTTGTTGTCGTAACTTTCGCCACTTTCTTCTTAGTCCTTCTTTTCTATTTCCGATGTATCACGTTCTTAAAACTCTACATGGCTTTTTCTTCTTTTGTTGTATTAGGTTTTCTTGGAGGTGAAATTTCGATTTTTTTGATTCAACATTTTAGTGTTCCAGTTGATTGTATAACGTTTTTGGTTGTTTTGTGTAATTTTGCTGTTGTTGGTGTTTGTGCTGTTTTTATGTCGAAAATGGCTATTTTTGTTACGCAAGGGTATTTGGTGGTTATTGGAATATTGGTTGCATATTGGTTTACTATGTTGCCTGAATGGACAACATGGGCTATGCTTGTTGCTATGGCTTTGTATGATCTTGCTGCGGTTTTGCTGCCTGTTGGGCCTTTGAGGCTTTTGGTTGAACTTGCTATGTCGAGGGATGAAGAAATTCCGGCTTTGGTTTATGAAGCTAGGCCGGTGAGTAATGATTGTATGGATCCTAGGGTTATTGAGGCTCGGAGGAGGTTATGGAGAGAGAGAAGGATTGAGAGTGCAATTCTGATAACTGAGAGTGGAAATTCAGTGTTGGGTAGTGGCGGACTTAATGTTGAACAATCATCACATTCCAATTCAGACGCGAATACTGTTCTAAGTACAAATTTAAATGAGAGTTTGACTCCGGAAAATGGTTCAAATTTGAATTCTAGTAGCACTTATGGCACACGTAATTTGGTAAGAGCCGAAGAGGGGCGAGTGCGGATTCAAGAAACCGATTCAGATCTTGCCACACCCTTGATTGATCATGGTGTGAATGTGCGGGTTCCTAGAGGAGAAGATGCGCTGTCGAATGAGAATTTGATGTTGGAGGGGATTGGATTGGCTTCATCCGGTGCAATCAAGTTGGGGCTAGGTGATTTTATCTTCTATAGTGTTTTGGTTGGCAGGGCTGCAATGTATGATTTTATGACCGTGTATGCATGTTATCTTGCAATTATTGCTGGTCTCGGCGTAACTTTGATGCTTTTGGCTTTATATCAGAAAGCGTTGCCTGCTCTACCTGTGTCAGTAGCACTCGGTGTGTTGTTTTATTTCTTGACCAGATTGTTACTTGAAGTATTTGTGGTGCAATGTTCCTTGAATCTATTGATGTTCTAA 1377 0.4081 MAETRRTSSSSTTVLDSLGEEIVRIITPVSICMFLVVILVSILNTNDSPTISTIANIAYDETTSDSSWDKFLGALLNSLSFVVVVTFATFFLVLLFYFRCITFLKLYMAFSSFVVLGFLGGEISIFLIQHFSVPVDCITFLVVLCNFAVVGVCAVFMSKMAIFVTQGYLVVIGILVAYWFTMLPEWTTWAMLVAMALYDLAAVLLPVGPLRLLVELAMSRDEEIPALVYEARPVSNDCMDPRVIEARRRLWRERRIESAILITESGNSVLGSGGLNVEQSSHSNSDANTVLSTNLNESLTPENGSNLNSSSTYGTRNLVRAEEGRVRIQETDSDLATPLIDHGVNVRVPRGEDALSNENLMLEGIGLASSGAIKLGLGDFIFYSVLVGRAAMYDFMTVYACYLAIIAGLGVTLMLLALYQKALPALPVSVALGVLFYFLTRLLLEVFVVQCSLNLLMF 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01207 458 Gene3D Presenilin 363 450 IPR042524 -
Mepo1g01207 458 Pfam Presenilin 19 448 IPR001108 GO:0004190|GO:0016020|GO:0016485
Mepo1g01207 458 PRINTS Presenilin family signature 199 216 IPR001108 GO:0004190|GO:0016020|GO:0016485
Mepo1g01207 458 PRINTS Presenilin family signature 26 36 IPR001108 GO:0004190|GO:0016020|GO:0016485
Mepo1g01207 458 PRINTS Presenilin family signature 182 189 IPR001108 GO:0004190|GO:0016020|GO:0016485
Mepo1g01207 458 FunFam Presenilin 349 449 - -
Mepo1g01207 458 SMART psh_8 72 444 IPR006639 GO:0004190|GO:0016020
Mepo1g01207 458 PANTHER PRESENILIN 9 458 IPR001108 GO:0004190|GO:0016020|GO:0016485
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01207 Mepo-Chr1 11824142 11825962 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01207 13 458 Miscellaneous Gene Families AT2G29900 58.797 3.88e-158 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01207 K04505 - gmx:100799643 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01207 1 11824142 11825962 Mepo1g01207 1 11824142 11825962 ECH