Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01200 ATGGCAGTGCAGGAAGCAAATCCTTCTTCTACTCCTAGTCCTCAAGTTGTTGGCAATGCCTTTGTGGAGCAATATTATCACATTTTGCATCAATCCCCTGACTTGGTGCACAGGTTCTATCAGGATTCGAGTCTCTTGAGTAGATCAGACAGCAATGGTGTGATGAAGACTGTCACAACTACACAAGCAATCAATGAAACAATTGTTTCCCTGAACTATGAAGATTGTACAGCAGAAATAAAAACTGCAGATGCTCAGGAGTCCTATGAGAATGGTGTGATAGTTTTAGTTACTGGATGCTTAACTGGGAAGGATAATGTGAGAAGGAAATTCTCACAGACATTCTTTTTGGCTCCACAAGATAAAGGATATTATGTCTTAAATGACGTCTTTAGGTACATTGAGGAGAATGATGCCCCACAGTTAAGTTCTGCCTCAATAAATACTGTCATCAATGAAAATGCTGAGGCTGTGCACATGCCAGAATCAGAGGACATGCACCCTTCCGAACATCTTGTGGAAGATTCTGCAACCTTTGCAGAGGATGAAAACCTTAATAATGGTGCTGAAGTTTATGATCCTATGGACAACAAGGAAGAAGGATTGGTTATTGATGAAGAGGTTGCTGCACCGCCTAACGATCTAAGTGAGAATGATATTGTTACAATTCACGATCCAATTTCTGCAGTTCAGGATGATGCACGAAAGACATCATATGCGTCAATTGTAATGAAAAGTAACACAGCATCTGGTCGTGTCTATGTTCCCAGCCGAGCTGCAAGAGTGGCGTCTGCTAAATCCAATGAACAGCGGCATGCTACCGCAAAATCTACTCCTGGGCCTGAGGCATTAGCCCCTAGTAGTGACAGTACACCAAGGACTAGTGACGTTCCTGAAGAAGCTGAAGGTCATTCCATATACATACGGAACTTGCCATTTAATGCAACAATTGAACTTCTTGAAGAGGTTTTTAAGAAATTTGGTCCTATTAAGCATGGTGGAGTCCAAGTAAGAAGCAGTAAGCATGGTTTCTGTTTTGGCTTTGTTGAATATGAGGAATTGAGTTCTGTGCAAAATGCGCTTAAGGCTTCACCTATCACTGTTGGTGAGCGGCAAGCTGTTATCGAGGAAAAGATATCAAGTACACGAGTAAGCAATGCCGGAAGAGGGAGGCATCCTTCGGGAAGAGGTGGTTTCCGAGGCGAGGGTTTCCGGGGGCGTGGGAGATTTGGTGGTGGACGAGGTTTTGGAAGAAATGAATTCAGAAACCAAGGGGAATTCTCAGGACGACCTAGGAGTTCTCACCGGACCAGTCAAAATGGAGGTGGGCGTGGTGGACGCCTTGGTGTGGGGAACCATAATGTTACACCATCTACTCCAGTGTGA 1386 0.4408 MAVQEANPSSTPSPQVVGNAFVEQYYHILHQSPDLVHRFYQDSSLLSRSDSNGVMKTVTTTQAINETIVSLNYEDCTAEIKTADAQESYENGVIVLVTGCLTGKDNVRRKFSQTFFLAPQDKGYYVLNDVFRYIEENDAPQLSSASINTVINENAEAVHMPESEDMHPSEHLVEDSATFAEDENLNNGAEVYDPMDNKEEGLVIDEEVAAPPNDLSENDIVTIHDPISAVQDDARKTSYASIVMKSNTASGRVYVPSRAARVASAKSNEQRHATAKSTPGPEALAPSSDSTPRTSDVPEEAEGHSIYIRNLPFNATIELLEEVFKKFGPIKHGGVQVRSSKHGFCFGFVEYEELSSVQNALKASPITVGERQAVIEEKISSTRVSNAGRGRHPSGRGGFRGEGFRGRGRFGGGRGFGRNEFRNQGEFSGRPRSSHRTSQNGGGRGGRLGVGNHNVTPSTPV 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01200 461 SUPERFAMILY NTF2-like 13 134 IPR032710 -
Mepo1g01200 461 MobiDBLite consensus disorder prediction 261 301 - -
Mepo1g01200 461 SMART rrm1_1 305 376 IPR000504 GO:0003723
Mepo1g01200 461 SUPERFAMILY RNA-binding domain, RBD 303 408 IPR035979 GO:0003676
Mepo1g01200 461 MobiDBLite consensus disorder prediction 426 441 - -
Mepo1g01200 461 Pfam Nuclear transport factor 2 (NTF2) domain 17 133 IPR002075 -
Mepo1g01200 461 FunFam Ras GTPase-activating protein-binding protein 1 292 419 - -
Mepo1g01200 461 MobiDBLite consensus disorder prediction 382 461 - -
Mepo1g01200 461 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 306 363 IPR000504 GO:0003723
Mepo1g01200 461 Gene3D - 7 137 - -
Mepo1g01200 461 ProSiteProfiles Nuclear transport factor 2 domain profile. 17 133 IPR018222 -
Mepo1g01200 461 Gene3D - 264 422 IPR012677 -
Mepo1g01200 461 FunFam Nuclear transport factor 2 family protein 8 137 - -
Mepo1g01200 461 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 304 389 IPR000504 GO:0003723
Mepo1g01200 461 MobiDBLite consensus disorder prediction 263 294 - -
Mepo1g01200 461 PANTHER RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN 13 431 IPR039539 -
Mepo1g01200 461 CDD NTF2 13 135 IPR018222 -
Mepo1g01200 461 CDD RRM_SF 306 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01200 Mepo-Chr1 11758357 11762505 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01200 K24983 - gmx:100801253 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01200 1 11758357 11762505 Mepo1g01200 1 11758357 11762505 ECH