Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01197 ATGTGGTGGGAAAAAGTTGAGGTGAAAGCGTTGAACGGAAAAGAAGATTCTCGAGGAGGAGATGGGCCAGGGAAGAGGTGGGGTCATACTTGTAACTCCATTAATGGTGGTAGACATCTCTATGTTTTTGGTGGTTACGGTAAAGATAACTGTCAAACCAACCAAGTTCATATCTTCGACACTGTGAATCAGACATGGAGCCAACCTGCAATAAAAGGCACCCCACCGACCCCGAGGGACAGTCACACTTGCAGTGTCGTTGGTCATCGACTATTTGTGTTTGGTGGTACTGATGGAACAAATCCACTCAAGGATTTGCACATATTAGACACTTCTTTGCAAACTTGGGATTCTCCAATTATAAGAGGAGAAGGGCCAGAGGCTCGTGAGGGTCATAGTGCAGCAGTTGTTGGCAAGCGGCTTTATATCTTTGGAGGTTGTGGAAAATCCGCTGATAATAACAATGAGGTCTACTACAATGATCTTTACATACTGAATACAGAGACACTTGTTTGGATGCGTCCTACAACATCAGGCACTCCACCATCTCCTCGTGATAGCCACTCATGCTCAACGTGGAAGAACAGAATTATTGTGATAGGGGGTGAAGACGGGCATGATTATTATTTGTCTGACGTCCATATCTTTGACACTGATACTCTGAACTGGAGGGAGCTGAGTACATCAGGCCAATTGTTGCCACCTCGGGCTGGTCATTCCACAGTTTCTTTTGGCAAGAACTTGTTCGTTTTTGGTGGATTTACAGATGCCCAAAATCTATACAATGACCTTTATACGCTTGATGTTGATACTGGTATTTGGAGAAACAATACAACTACAACCAATTGTCCTTCTGCTAGATTTTCTGTAGCTGGTGACTGTTTAGACCCATCTATGGGTGGTGTTCTTGTGTTTATTGGCGGTTGTAATAAGAGTCTTGAAGCCCTGGATGATATGTATTACCTACATACAGGTATTTCTAGGGAAAATGAACTGAGACCAGAGAAGTTATCTATGAAGAAGATATTGAAGCTGAAATGCCAAGAAGGCCAAAATCTCATTCCTGGCCAAAATCAAGATATCGGTAGATATGGAGTGGGTAATGATGCCGATCAGGTCACAACTATGATGAATTATAGCCAGCCAGGTAGACCAAATATCCCGGCAAATCAATCACTGCCTCCACATGGAAAGAAAACATTTGAAGCCAAGGTTACTGAAAACATCTCAGAAGGATATACTATTGAAACCGTTATTGATGGAAAGCCTCTTCGTGGAATTCTGTTTTTAAACAAACAAAACTCTCTTCACTCATCTGCTCATGCTTTCAATAGGAAAAGGACTGCTGGTGAAATTGATGGTGTCATCTCAAATGGTACACATTCTAACAAATTGAAGACTCATAAAGTGAATCAAATGGAAAATAGACATTCAGAACCTCTCTATCACAGTTCTGAAGCTGTTGTTGCACTTGCAGCAAGGAATCCAATGACTGCCAATGCTTCGGTTAACCACAAGGTTCCTACCAACCCAGAACTAGAAGCTGCTTCTTTGAATCGAAATGCTGAAAAAATTGAAACACCAACCTTGGGGGTAAACTTGAAAAATGATGGAGCAAATGATGTGACAAACTCCAGAGTTGAAGCCCAAACAAATGTGCCGATTTCCAACTCAGAAGTTTCAAGACTTGATAAAAATAGCGATGCATCAAACTGCAACACAGAATTTATGAAACCTGCCACAGCTGAGAGTGCTGTGAATTTGTCAAATCAAGGTGCACTGGTGGATTCTACAATTCCAAGGACAGGAGAATGCAGTGAACCAGCAAAATGA 1833 0.4195 MWWEKVEVKALNGKEDSRGGDGPGKRWGHTCNSINGGRHLYVFGGYGKDNCQTNQVHIFDTVNQTWSQPAIKGTPPTPRDSHTCSVVGHRLFVFGGTDGTNPLKDLHILDTSLQTWDSPIIRGEGPEAREGHSAAVVGKRLYIFGGCGKSADNNNEVYYNDLYILNTETLVWMRPTTSGTPPSPRDSHSCSTWKNRIIVIGGEDGHDYYLSDVHIFDTDTLNWRELSTSGQLLPPRAGHSTVSFGKNLFVFGGFTDAQNLYNDLYTLDVDTGIWRNNTTTTNCPSARFSVAGDCLDPSMGGVLVFIGGCNKSLEALDDMYYLHTGISRENELRPEKLSMKKILKLKCQEGQNLIPGQNQDIGRYGVGNDADQVTTMMNYSQPGRPNIPANQSLPPHGKKTFEAKVTENISEGYTIETVIDGKPLRGILFLNKQNSLHSSAHAFNRKRTAGEIDGVISNGTHSNKLKTHKVNQMENRHSEPLYHSSEAVVALAARNPMTANASVNHKVPTNPELEAASLNRNAEKIETPTLGVNLKNDGANDVTNSRVEAQTNVPISNSEVSRLDKNSDASNCNTEFMKPATAESAVNLSNQGALVDSTIPRTGECSEPAK 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01197 610 Pfam Galactose oxidase, central domain 26 76 - -
Mepo1g01197 610 SUPERFAMILY Galactose oxidase, central domain 18 227 IPR011043 -
Mepo1g01197 610 Gene3D - 3 152 IPR015915 GO:0005515
Mepo1g01197 610 PANTHER KELCH REPEAT DOMAIN 17 117 - -
Mepo1g01197 610 SMART kelc_smart 90 139 IPR006652 GO:0005515
Mepo1g01197 610 SMART kelc_smart 39 89 IPR006652 GO:0005515
Mepo1g01197 610 SMART kelc_smart 196 246 IPR006652 GO:0005515
Mepo1g01197 610 Gene3D - 153 365 IPR015915 GO:0005515
Mepo1g01197 610 Pfam Kelch motif 126 169 - -
Mepo1g01197 610 Pfam Galactose oxidase, central domain 247 289 - -
Mepo1g01197 610 Pfam Galactose oxidase, central domain 195 243 - -
Mepo1g01197 610 Pfam Kelch motif 78 116 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01197 Mepo-Chr1 11721540 11727692 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01197 116 322 Acyl Lipid Metabolism Gene Families AT3G05420 31.797 1.24e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01197 - - cam:101509662 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01197 1 11721540 11727692 Mepo1g01197 1 11721540 11727692 ECH