Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01158 ATGCCTACCGTCAGTGTAGGGCGGGACCGTCTGTTTGCGGCTCTAGGAAAAACTTACACACAAGAGGAATTTGAAGACCTATGTTTCAGTTTTGGGATCGAGCTTGACGACGTTACTACAGAAAAAGCAATTGTTAGAAAAGAAAAGCATTTGGAAGAAGAAGCTGATGAGGATGAAGAAGTTATCTACAAAATTGAAATTCCTGCTAATAGATATGATCTACTTTGCCTCGAAGGATTGGCTCAAGCCCTCCGAGTTTTCTGTGGGTTCCAGGAAATCCCTACTTACAAATTGTCTGACATTAACAAGGATGCAATGCTTAAAATGCATGTGAAGCCAGAGACATCTCTGATTCGTCCACATATTGTTTGTGCCGTACTAAGAGGTTTAACTTTTGATAAAGCGAGATACAACAGCTTCATTGACCTCCAGGACAAATTGCACCAAAATATTTGTAGGCGAAGAACCCTTGTTGCCATTGGCACTCATGATCTGGATAAACTGGAGGGTCCTTTTACCTATGAGGCTTTACCACCTTCGAGTATTAACTTTACGCCACTAAAACAGGAAAGGAGCTTCAGGGCTGATGAGCTCATGGAGTTCTACAAATCAGATTTGAAACTGAAGAAATTCTTGCATATAATTGAGGACTCTCCCGTTTATCCTGTTATATATGATAGCAAGAGAACTGTTTTATCTTTACCCCCAATTATCAATGGTGCACATTCGGCCATCACTCTGGAGACAAAGAACGTATTTATTGAATGCACCGCTACTGATCTGACAAAGGCGAAGATTGTTTTAAATACAATGGTAACAGCCTTCGCGGAATATTGTACAAATAAGTTTGTCATTGAACCAGTTGAAGTGATTTCTTCTGATGGAAAATCTCACATATACCCTGATTTATCTGTCTACAATATGGAAGTTTCTCTATCTTACATTACTGGATTGATTGGAGTATCATTGGAGGCAGAAGAGGTTACCAAGTTCTTAAACCGGATGCAATTGCACGCCAAGCAATCTACATCTGACAATAAACAGTGCAACTTTATTGTATCTGTACCTCCTACTAGAAGTGATGTTCTTCATCCATGTGATGTTATGGAGGATGTTGCAATAGCTTATGGATTCAATGCTATCAAGGATCAAGCAATAGTTGATAATAAGGGGTCAAAGAGATTAGCTGCTTCCTTGACACTACTTCCTCTGAATGAACTGAGCGATCTTATCAGAAAAGAGGTTGCAATGATTGGGTTCACGGAGGTTTTGACTTTTATACTCTGCTCTAAAAAAGAAAACTTTTCCATGCTAAACCGCAAAGATGACAAATCCAAGGCGGTTATCATTGGAAACCCTAGGTCTTCAGACTTCGAGGCTGTCCGGACTAGTCTTATGCCTGGCATTTTGAAAACTGTTGCTCACAACAAGGACCACCCAAAGCCCATAAAGATTTTTGAAGTGGGTGATATAGCTATTTTGGATGACAATGATGTTGGTGCAAAAAATCTCCGCCAACTTGCTGCACTTTATTGTGGTGCTAATGCAGGATTTGAGATAATTCATGGATTGGTGGACAAAGTAATGGAAAAGAATGGGATTACCTTTGTTTCACCTGGCGATAAATCAGGGTATTATATTGAGCGGTCAGATGAGCCCGAGTTTCTTGCTGGTAGACAAGCCAGAATTATTTACAACGGAAAGCAAGTTGGGACTTTTGGCATTGTTCATCCGGAGGTATTAAACAACTTCGACATTCCTGATCCCTGCTCCTTTGTAGAACTCAACATTGAAAGTTTCTTGTAA 1806 0.4014 MPTVSVGRDRLFAALGKTYTQEEFEDLCFSFGIELDDVTTEKAIVRKEKHLEEEADEDEEVIYKIEIPANRYDLLCLEGLAQALRVFCGFQEIPTYKLSDINKDAMLKMHVKPETSLIRPHIVCAVLRGLTFDKARYNSFIDLQDKLHQNICRRRTLVAIGTHDLDKLEGPFTYEALPPSSINFTPLKQERSFRADELMEFYKSDLKLKKFLHIIEDSPVYPVIYDSKRTVLSLPPIINGAHSAITLETKNVFIECTATDLTKAKIVLNTMVTAFAEYCTNKFVIEPVEVISSDGKSHIYPDLSVYNMEVSLSYITGLIGVSLEAEEVTKFLNRMQLHAKQSTSDNKQCNFIVSVPPTRSDVLHPCDVMEDVAIAYGFNAIKDQAIVDNKGSKRLAASLTLLPLNELSDLIRKEVAMIGFTEVLTFILCSKKENFSMLNRKDDKSKAVIIGNPRSSDFEAVRTSLMPGILKTVAHNKDHPKPIKIFEVGDIAILDDNDVGAKNLRQLAALYCGANAGFEIIHGLVDKVMEKNGITFVSPGDKSGYYIERSDEPEFLAGRQARIIYNGKQVGTFGIVHPEVLNNFDIPDPCSFVELNIESFL 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01158 601 Gene3D - 306 381 - -
Mepo1g01158 601 Gene3D - 1 88 - -
Mepo1g01158 601 Pfam tRNA synthetase B5 domain 308 378 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Mepo1g01158 601 FunFam phenylalanine--tRNA ligase beta subunit 402 601 - -
Mepo1g01158 601 SUPERFAMILY PheT/TilS domain 221 280 - -
Mepo1g01158 601 Gene3D - 100 304 IPR020825 -
Mepo1g01158 601 SMART B5_2 305 378 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Mepo1g01158 601 SMART B3_4_2 118 280 IPR005146 GO:0003723|GO:0004826
Mepo1g01158 601 Pfam Phenylalanyl tRNA synthetase beta chain CLM domain 403 597 IPR041616 -
Mepo1g01158 601 SUPERFAMILY Putative DNA-binding domain 5 94 IPR009061 -
Mepo1g01158 601 Pfam B3/4 domain 119 279 IPR005146 GO:0003723|GO:0004826
Mepo1g01158 601 PANTHER PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 1 601 IPR045060 GO:0004826|GO:0006432
Mepo1g01158 601 ProSiteProfiles B5 domain profile. 303 383 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Mepo1g01158 601 FunFam phenylalanine--tRNA ligase beta subunit 100 304 - -
Mepo1g01158 601 Pfam Phe-tRNA synthetase beta subunit B1 domain 1 88 IPR040659 -
Mepo1g01158 601 NCBIfam phenylalanine--tRNA ligase subunit beta 1 601 IPR004531 GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432
Mepo1g01158 601 CDD PheRS_beta_core 403 600 IPR041616 -
Mepo1g01158 601 SUPERFAMILY Putative DNA-binding domain 307 382 IPR009061 -
Mepo1g01158 601 SUPERFAMILY Class II aaRS and biotin synthetases 375 600 IPR045864 -
Mepo1g01158 601 FunFam Phenylalanyl-tRNA synthetase, beta subunit 306 381 - -
Mepo1g01158 601 FunFam Phenylalanine--tRNA ligase beta subunit 1 89 - -
Mepo1g01158 601 Gene3D Bira Bifunctional Protein; Domain 2 402 601 IPR045864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01158 Mepo-Chr1 11347251 11355577 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01158 K01890 - gmx:100805249 1119.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01158 1 11347251 11355577 Mepo1g01158 1 11347251 11355577 ECH