Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01147 ATGTCAAAGGTTAAAGTTGATCAACTTAATCAACTAAGAGAAATCTTCAGTCGATTCGACATGGATTCCGATGGCAGCCTAACAATGTTAGAACTAGCAGCACTTATTCGTTCGTTAGGCGTAAGGCCTTCAGGAGACGAAGTTCAAATCCTATTAACCAAAATGGACTCAAACGGAAACGGTTCTGTTGAGTTTGATGAATTAGTAGAAGCCATAATGCCGAACATGAATGCAGAAGTATTGGTGAATCAAGAACAACTAATAGGTGTGTTCAAGTGCTTCGATCGCGATGGGAATGGATTCATTTCAGCAGCTGAATTGGCTGGAGCAATGGCTAAAATGGGTCAGCCACTTACATATAAAGAGCTTATTGAGATGATTAGAGAGGCTGATATGGATGGTGATGGTGTTATTAGTTTTAGTGAGTTTGCTACAATCATGGCTCGTTCTGCTTCTGATTTATTAGGAATCTTTGAATACAGAAACAAAACACATTCATTTCAATTATAA 510 0.3843 MSKVKVDQLNQLREIFSRFDMDSDGSLTMLELAALIRSLGVRPSGDEVQILLTKMDSNGNGSVEFDELVEAIMPNMNAEVLVNQEQLIGVFKCFDRDGNGFISAAELAGAMAKMGQPLTYKELIEMIREADMDGDGVISFSEFATIMARSASDLLGIFEYRNKTHSFQL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01147 169 ProSiteProfiles EF-hand calcium-binding domain profile. 43 78 IPR002048 GO:0005509
Mepo1g01147 169 SMART efh_1 122 150 IPR002048 GO:0005509
Mepo1g01147 169 SMART efh_1 47 75 IPR002048 GO:0005509
Mepo1g01147 169 SMART efh_1 86 114 IPR002048 GO:0005509
Mepo1g01147 169 SMART efh_1 11 39 IPR002048 GO:0005509
Mepo1g01147 169 ProSitePatterns EF-hand calcium-binding domain. 56 68 IPR018247 -
Mepo1g01147 169 ProSiteProfiles EF-hand calcium-binding domain profile. 7 42 IPR002048 GO:0005509
Mepo1g01147 169 FunFam Probable calcium-binding protein CML15 1 77 - -
Mepo1g01147 169 ProSitePatterns EF-hand calcium-binding domain. 95 107 IPR018247 -
Mepo1g01147 169 Pfam EF-hand domain pair 10 72 IPR002048 GO:0005509
Mepo1g01147 169 Pfam EF-hand domain pair 85 147 IPR002048 GO:0005509
Mepo1g01147 169 Gene3D - 83 166 - -
Mepo1g01147 169 CDD EFh 11 73 IPR002048 GO:0005509
Mepo1g01147 169 Gene3D - 1 82 - -
Mepo1g01147 169 PANTHER CALCIUM BINDING PROTEIN 83 147 - -
Mepo1g01147 169 CDD EFh 86 148 IPR002048 GO:0005509
Mepo1g01147 169 ProSiteProfiles EF-hand calcium-binding domain profile. 82 117 IPR002048 GO:0005509
Mepo1g01147 169 ProSitePatterns EF-hand calcium-binding domain. 20 32 IPR018247 -
Mepo1g01147 169 ProSitePatterns EF-hand calcium-binding domain. 131 143 IPR018247 -
Mepo1g01147 169 FunFam CALML5 isoform 1 80 149 - -
Mepo1g01147 169 ProSiteProfiles EF-hand calcium-binding domain profile. 118 153 IPR002048 GO:0005509
Mepo1g01147 169 SUPERFAMILY EF-hand 5 162 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01147 Mepo-Chr1 11239000 11239671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01147 7 157 EF-hand Containing Proteins AT1G18530 73.510 1.04e-81 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01147 K13448 - gmx:100795885 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01147 1 11239000 11239671 Mepo1g01147 1 11239000 11239671 ECH