Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01118 ATGGATGAAAACTTCGACGGATTCAATGATAAACTCCCTGAGCTCAAACTAGATTCCAAGCAAGCACAAGGGTTTCTTTCGTTTTTCAAAACCCTACCTGATGATCCAAGGGCCATTAGGTTCTTTGACCGTCGGGATTACTATACCGCCCACGGTGAGAATGCAACATTCATTGCCAAAACCTACTATCACACTACTACTGCTCTGCGACAGTTGGGTAGTGGATCAAACGCTCTTTCCAGTGTGAGTGTCAGTAGGAACATGTTCGAAACAATAGCCCGTGATCTACTCTTGGAGAGAACAGACCATACACTTGAGGTCTATGAGGGCAGCAGCTCTAACTGGCAACTGGCCAAAAGCGGCACACCTGGTAATATTGGCAGTTTTGAAGATGTTCTGTTTGCTAACAGTGAAATGCAAGATTCTCCAGTTGTTGTTGCGCTGTCACTTAACTTCCGTGAAAATGGGTGCACCATTGGATTAGGCTTTGTTGATCTAACTAAGAGACTACTTGGGATAGCTGAATTCCTCGATGACAGTCACTTCACGAATGTGGAGTCAGCATTGGTTGGTCTTGGCTGCAAAGAATGCCTTGTGCCAATTGAGCGTGGAAAATCTAATGAATACAAAATGTTGTGTGATGTGTTAACTAAATGTGGTGTGATGCTGACTGAGAGAAAGAAATCCGAGTTTAAGACTAGAGATCTGGTACAGGATCTTGGAAGGCTTGTCAAAGGTTCTATTGAAGCAGTTCAAGATTTAGTGTCTGGATTTGAATTTGCACCTGGTGCTTTGGGGGCACTGCTCTCTTATGCAGAGTTACTTGCAGACGAAAGCAATTATGAAAATTATACTCTGCGTAGGTACAATCTTGACTGTTACATGAGGTTAGATTCTGCAGCCATGAGGGCACTTAATATCTTAGAAAGCAAAACTGATGCAAACAAAAATTTTAGTTTATTTGGTCTCATGAATAGGACCTGTACAGCTGGAATGGGAAAACGACTATTGCATATGTGGCTAAAACAGCCATTATTAAATGTAAACGATATTAACTCCAGGTTGGATGTAGTACAAGCATTTGTAGAGGACACCGTGCTTCGCCAAGATCTGAGACAGCATCTGAAAAGAATATCAGACATTGAGCGACTGGTGCACAATCTTCAGAAGCGAAAAGCTGGTCTGCAACATGTTGTTAAACTTTATCAGTCAAGTATAAGACTGCCTTACATTAAAAGTGCTCTGGACAGGTATGATGGACAGTTTTCTTCAATGATGAAGAGCAGGTATTTGAAAGATTTGGAGCTATGGACTGGTGCTGATCGCCTAAACAAATTTATTGAGCTTGTAGAACATTCTGTTGACCTTGATCATCTAGAGAACGGGGAATATATGATTTCTTCAACTTATGACACTACACTAACTGGACTGAAGGAGCAGCAAGAATTACTAGAGAGCGAAATACATAACTTGCATAAACAAACTGCCATTGATCTTGATCTTCCTGCAGATAAGGCATTAAAGTTAGACAAGGGAACACAATTTGGACATGTTTTTAGAATCACAAAGAAGGAAGAGCCGAAAATAAGGACAAAGCTCAACACCCAGTTTATCGTGCTGGAAACCCGTAAAGATGGAGTGAAGTTTACCAACACTAAGCTAAAAAAATTAGGGGACAAATATCAACAAATTCTTGAAGAGTACAAAAGTTGTCAAAGACAGATGGTTATAAAAGTAGTAGATATTTCAGCATCTTTCTCTGAGGTGTTTGAATCTTTAGCTGAATTGATTTCTGAATTGGACGTGTTACTAAGCTTTGCTGATTTGGCTTCTAGTTGTCCTACTCCCTATACAAGACCTGACATCACCTCATCGGACGAAGGAGATATTATTTTAGAAGGTAGCAGACACCCTTGTGTGGAGGCTCAAGACTGGGTGAATTTCATACCAAATGATTGTAAGCTTATCAGAGGAAAAAGTTGGTTTCAAATAATAACAGGGCCTAACATGGGTGGGAAATCAACATTCATCCGGCAGGTGGGAGTGAATATTTTGATGGCTCAAGTTGGTTGCTTTGTTCCATGTGACAAAGCCAGCATATCTGTTCGTGATTGCATTTTTGCTCGTGTTGGTGCAGGTGATTGCCAACTTCGTGGAGTTTCTACCTTTATGCAAGAAATGCTTGAAACTTCATCAATATTAAAAGGAGCTACCGACAAGTCCTTGATAATCATTGATGAGTTGGGACGTGGCACATCAACTTATGACGGATTTGGTCTCGCGTGGGCCATTTGTGAGCACATTGTTGACGTGATCAAAGCACCTACTTTATTTGCAACCCACTTTCATGAGCTGACTGCATTAGCCGATGAAAATGGCAGCAATGATACACATAAGCAAATTGTTGGTGTGGCAAATTATCATGTTAGTGCACATATTGATGCATCAACTCGCAAGCTAACTATGCTATACAAGGTTGAACCAGGACCTTGTGATCAGAGTTTCGGTATTCATGTCGCTGAGTTTGCAAACTTCCCTGAAAGTGTTGTCGCCTTAGCTAGAGAAAAGGCAGCAGAATTGGAAGATTTTTCTCCTTCTGCCCTATCCTTAATGGAATCTACAGAAGAGGTGGGTTCTAAACGTAAGAGAGTGTTTGAAACTGATGAGATGTCTAAAGGGGCCGTAAAGGCTCGCCAAATTCTTGAAGCATTTGTTGCTTTGCCACTAGAAACCATGGACAAAACACAAGCTTGGCAAGAAGTAAGGAAGTTGAAAGATAATCTAGAGAAGGATGCACAACACTGTCATTGGTTGCAAAAATTCTAG 2826 0.4105 MDENFDGFNDKLPELKLDSKQAQGFLSFFKTLPDDPRAIRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGSGSNALSSVSVSRNMFETIARDLLLERTDHTLEVYEGSSSNWQLAKSGTPGNIGSFEDVLFANSEMQDSPVVVALSLNFRENGCTIGLGFVDLTKRLLGIAEFLDDSHFTNVESALVGLGCKECLVPIERGKSNEYKMLCDVLTKCGVMLTERKKSEFKTRDLVQDLGRLVKGSIEAVQDLVSGFEFAPGALGALLSYAELLADESNYENYTLRRYNLDCYMRLDSAAMRALNILESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLNVNDINSRLDVVQAFVEDTVLRQDLRQHLKRISDIERLVHNLQKRKAGLQHVVKLYQSSIRLPYIKSALDRYDGQFSSMMKSRYLKDLELWTGADRLNKFIELVEHSVDLDHLENGEYMISSTYDTTLTGLKEQQELLESEIHNLHKQTAIDLDLPADKALKLDKGTQFGHVFRITKKEEPKIRTKLNTQFIVLETRKDGVKFTNTKLKKLGDKYQQILEEYKSCQRQMVIKVVDISASFSEVFESLAELISELDVLLSFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQEMLETSSILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVDVIKAPTLFATHFHELTALADENGSNDTHKQIVGVANYHVSAHIDASTRKLTMLYKVEPGPCDQSFGIHVAEFANFPESVVALAREKAAELEDFSPSALSLMESTEEVGSKRKRVFETDEMSKGAVKARQILEAFVALPLETMDKTQAWQEVRKLKDNLEKDAQHCHWLQKF 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01118 941 FunFam DNA mismatch repair protein 123 292 - -
Mepo1g01118 941 Pfam MutS domain II 144 284 IPR007860 GO:0005524|GO:0006298|GO:0030983
Mepo1g01118 941 Pfam MutS domain III 301 607 IPR007696 GO:0005524|GO:0006298|GO:0030983
Mepo1g01118 941 FunFam DNA mismatch repair protein 295 512 - -
Mepo1g01118 941 Coils Coil 474 494 - -
Mepo1g01118 941 Pfam MutS domain I 24 129 IPR007695 GO:0005524|GO:0006298|GO:0030983
Mepo1g01118 941 ProSitePatterns DNA mismatch repair proteins mutS family signature. 741 757 IPR000432 GO:0005524|GO:0006298|GO:0030983
Mepo1g01118 941 FunFam DNA mismatch repair protein MSH2 514 617 - -
Mepo1g01118 941 Pfam MutS family domain IV 470 567 IPR007861 GO:0005524|GO:0006298|GO:0030983
Mepo1g01118 941 Gene3D DNA repair protein MutS, domain I 9 122 IPR016151 GO:0005524|GO:0006298|GO:0030983
Mepo1g01118 941 Gene3D - 618 938 IPR027417 -
Mepo1g01118 941 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 57 872 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Mepo1g01118 941 Gene3D - 295 523 - -
Mepo1g01118 941 Gene3D - 524 617 - -
Mepo1g01118 941 Coils Coil 371 391 - -
Mepo1g01118 941 SMART DNAend 315 643 IPR007696 GO:0005524|GO:0006298|GO:0030983
Mepo1g01118 941 SMART mutATP5 660 858 IPR000432 GO:0005524|GO:0006298|GO:0030983
Mepo1g01118 941 SUPERFAMILY DNA repair protein MutS, domain III 298 612 IPR036187 -
Mepo1g01118 941 PIRSF MSH2 9 941 IPR011184 GO:0005524|GO:0006298|GO:0030983
Mepo1g01118 941 CDD ABC_MSH2_euk 631 861 IPR032642 GO:0005524
Mepo1g01118 941 Pfam MutS domain V 663 861 IPR000432 GO:0005524|GO:0006298|GO:0030983
Mepo1g01118 941 Coils Coil 554 574 - -
Mepo1g01118 941 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 617 862 IPR027417 -
Mepo1g01118 941 FunFam DNA mismatch repair protein MSH2 618 938 - -
Mepo1g01118 941 FunFam DNA mismatch repair protein 9 122 - -
Mepo1g01118 941 Gene3D MutS, connector domain 123 292 IPR036678 GO:0005524|GO:0006298|GO:0030983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01118 Mepo-Chr1 10886233 10897013 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01118 K08735 - gmx:100792272 1647.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01118 1 10886233 10897013 Mepo1g01118 1 10886233 10897013 ECH