Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00680 ATGAACTCAATTCCCTCTCCTCCACCTTCTTCATCTCCAATCCTCACACAATCCAAAAACCCTAACTATCTCTTCAAATTCAACCTCAAAGTTCCCATTTTACCCTTCCATTCTTCATCTTCCCACCTCACCGCACATGCACCATGTTGCAGTCTCAGGGACTCAACTTCAGTGTTGGACAAAAATGCCCCTTCCTCCGAACAGAGTACCCGAAATTACATTCCACCAAAAGACTCAAACTTTGATGGAACGCTCGTGGTTCGCCGGCCGGTGAAGGAGTTTTCCGGTGAAAACTCCGGTGAGGAGGTGAAGAAGGAGAAGGAAATTGTGAAAGAGGAAGCTAAAGCTTCTTCAATTGATGTTGGGTTAACTACATTTGCGAAGAAGATGCCGATATTTGAACCGGGGAGAGTGCAATCAGACTCCAAAGATAAGCTTTTGACTGTGAATTTGGACTTGGCGTTGTATAAGGCTAAGGTTTTGGCTAGAAACTTTCGTTATGAAGAAGCTGAGGAAATGCTTCTGAAGTGTTTAAGCTATTGGCCGGAAGATGGTAGACTTTATGTTGCACTCGGGAAAATTATGAGCAAGCAATCTAAAACGAGTCAAGCTAAAGAGATTTATGAGAAAGGTTGCCAGGCTACTCAGGGTGAAAATGCATTTATTTGGCAGTGTTGGGCTGTTCTTGAAAAGAAAATGGGAAATGTCAGGAGAGCAAGAGAACTTTTCGATGCCGCAACGGTTGCTGATAAGAAACATGTTGCTGCTTGGCATGGTTGGGCAGTTCTAGAGTTAAAGCAAGGAAATATAACGAAGGCAAGGAATCTGCTTTCGAAAGGTCTTCAATACTGTGGACAGAATGAGTACATATACCAAACACTTGCATTGCTTGAAGCTAAGGCGAATAGATGTCAGCAGGCTCGATATTTATTCAATCAGGCCACAAAGTGTAATCCTAAAAGCTGTGCTAGTTGGCTTGCTTGGGCTCAAATGGAGGTGGAACAGGAAAACTATCGTATCGCTAGGAAATTGTTCGAGAATGCAGTGCAGGCAAGTCCTAAAAATAGGTTTGCTTGGCATGTCTGGGGCGTTTTTGAAGCTAACCTGGGCAAGATTGACAAGGGAAGAAAACTTCTAAAGATAGGCCATGCTCTAAATCCAAGGGATGCTGTTCTCCTTCAGTCTCTTGCATTAATAGAATACAAACACTCAAGTGCTAATCGTGCTCGTGTTTTGTTCAAGAGAGCGTCTGAATTGGATCCCAAGCATCAACCTGTTTGGTTTGCTTGGGGTTGGATGGAATGGAAGGAAGGAAATTTGAACACTGCTAGAGAATTATACCGAAAAGCTTTATCAATTGATCAGAACAGTGAGAGTGCTGCAAGGTGTCTCCAGGCATGGGGTGTTCTGGAGCAGAGGGTTGGGAATCTTTCGGCTGCTCGAAGATTGTTTAGATCCTCGTTGAATATAAATTCTCAGAGTTATGTGACATGGATGACTTGGGCATCACTGGAGGAAGATCAAGGAAATCCTGTGCGTGCTGAAGAAATTCGTAACCTTTACTTCCAGCAGCGCACAGAAGTTGTAGATGATGCTTCGTGGGTTATGGGATTCTTAGATATTTTAGACCCTGCCATTGAGAGTTTGAGGAGACTCCTGAAGATGAACCCGAATTCGTTCAACGTGCCACCTGATTCCATGAGAAATATTACCGGATCGAAGAAAAACATGGTTGATTATTCTAGTGAGGATGATGATAATGATGTGGACGATGACAGCGAGTTTGATTTGGATGCTTTCATTATGGACAGGTTATCCATAGATGTGTCCAAGCTGGAAGTTCAACTGGAAACGCCGAAATTTCCTTCTACGAACAAAATTTTGTCTCCAAGAAGGATATGGCGACCAAGTAGTAGAACTGCCAACCAAAGTGTAAGTTCAAAATACAGGTAA 1953 0.4311 MNSIPSPPPSSSPILTQSKNPNYLFKFNLKVPILPFHSSSSHLTAHAPCCSLRDSTSVLDKNAPSSEQSTRNYIPPKDSNFDGTLVVRRPVKEFSGENSGEEVKKEKEIVKEEAKASSIDVGLTTFAKKMPIFEPGRVQSDSKDKLLTVNLDLALYKAKVLARNFRYEEAEEMLLKCLSYWPEDGRLYVALGKIMSKQSKTSQAKEIYEKGCQATQGENAFIWQCWAVLEKKMGNVRRARELFDAATVADKKHVAAWHGWAVLELKQGNITKARNLLSKGLQYCGQNEYIYQTLALLEAKANRCQQARYLFNQATKCNPKSCASWLAWAQMEVEQENYRIARKLFENAVQASPKNRFAWHVWGVFEANLGKIDKGRKLLKIGHALNPRDAVLLQSLALIEYKHSSANRARVLFKRASELDPKHQPVWFAWGWMEWKEGNLNTARELYRKALSIDQNSESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYVTWMTWASLEEDQGNPVRAEEIRNLYFQQRTEVVDDASWVMGFLDILDPAIESLRRLLKMNPNSFNVPPDSMRNITGSKKNMVDYSSEDDDNDVDDDSEFDLDAFIMDRLSIDVSKLEVQLETPKFPSTNKILSPRRIWRPSSRTANQSVSSKYR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00680 650 SUPERFAMILY TPR-like 348 510 IPR011990 GO:0005515
Mepo1g00680 650 SMART tpr_5 390 423 IPR019734 GO:0005515
Mepo1g00680 650 SMART tpr_5 322 355 IPR019734 GO:0005515
Mepo1g00680 650 SMART tpr_5 461 494 IPR019734 GO:0005515
Mepo1g00680 650 SMART tpr_5 220 253 IPR019734 GO:0005515
Mepo1g00680 650 SMART tpr_5 288 321 IPR019734 GO:0005515
Mepo1g00680 650 SMART tpr_5 254 287 IPR019734 GO:0005515
Mepo1g00680 650 SMART tpr_5 356 389 IPR019734 GO:0005515
Mepo1g00680 650 SMART tpr_5 185 218 IPR019734 GO:0005515
Mepo1g00680 650 SMART tpr_5 424 457 IPR019734 GO:0005515
Mepo1g00680 650 SMART tpr_5 151 184 IPR019734 GO:0005515
Mepo1g00680 650 SMART hat_new_1 404 436 IPR003107 GO:0006396
Mepo1g00680 650 SMART hat_new_1 336 368 IPR003107 GO:0006396
Mepo1g00680 650 SMART hat_new_1 370 402 IPR003107 GO:0006396
Mepo1g00680 650 SMART hat_new_1 199 232 IPR003107 GO:0006396
Mepo1g00680 650 SMART hat_new_1 475 507 IPR003107 GO:0006396
Mepo1g00680 650 SMART hat_new_1 438 473 IPR003107 GO:0006396
Mepo1g00680 650 SMART hat_new_1 234 266 IPR003107 GO:0006396
Mepo1g00680 650 SMART hat_new_1 302 334 IPR003107 GO:0006396
Mepo1g00680 650 SMART hat_new_1 268 300 IPR003107 GO:0006396
Mepo1g00680 650 MobiDBLite consensus disorder prediction 57 77 - -
Mepo1g00680 650 FunFam PsbB mRNA maturation factor Mbb1 391 541 - -
Mepo1g00680 650 Gene3D Tetratricopeptide repeat domain 392 571 IPR011990 GO:0005515
Mepo1g00680 650 Gene3D Tetratricopeptide repeat domain 145 391 IPR011990 GO:0005515
Mepo1g00680 650 MobiDBLite consensus disorder prediction 57 79 - -
Mepo1g00680 650 PANTHER PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107 10 642 IPR044624 GO:0003729|GO:0006397
Mepo1g00680 650 Pfam Tetratricopeptide repeat 426 456 IPR019734 GO:0005515
Mepo1g00680 650 SUPERFAMILY TPR-like 166 400 IPR011990 GO:0005515
Mepo1g00680 650 ProSiteProfiles TPR repeat profile. 424 457 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00680 - - vun:114175850 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00680 1 6545105 6550545 Mepo1g00680 1 6545105 6550545 ECH