Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00488 ATGGCTTCAACTTCCACAATTTCAATGGCTGTGCCATTAACTTGTGCCAGCAAGAAGCTAGAGGCACCAACCTCTCAAGCATTCTTGAAGGCACCGTTGACTCTGAAGCCATCAAAGTCTGTGGCAGCAACAAACCGTAACGCAAGGTTTGTAGTGAAAGCATCCTTGAAAGAGAAAATTGTGACAGGGCTAACTGCAGCTGCATTAACAGCTTCAATGATTTCTCCTGATGTAGCTGAAGCTGCTACTGTTTCACCTTCTCTCAAGAATTTCTTGCTCAGCATCGTTTCTGGTGGAGTTGTGGTTACTGCTATTCTTGGTGCTGTTATCGGTGTTTCCAATTTCGATCCTGTTAAGCGAGGTTGA 366 0.4481 MASTSTISMAVPLTCASKKLEAPTSQAFLKAPLTLKPSKSVAATNRNARFVVKASLKEKIVTGLTAAALTASMISPDVAEAATVSPSLKNFLLSIVSGGVVVTAILGAVIGVSNFDPVKRG 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00488 121 Pfam Photosystem II reaction centre X protein (PsbX) 84 120 IPR009518 GO:0009523|GO:0015979|GO:0016020
Mepo1g00488 121 FunFam Photosystem II psbX protein 83 121 - -
Mepo1g00488 121 Gene3D Single helix bin 83 121 - -
Mepo1g00488 121 PANTHER OS07G0673550 PROTEIN 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00488 Mepo-Chr1 4651634 4652321 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00488 - - gmx:100792794 159.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00488 1 4651634 4652321 Mepo1g00488 1 4651634 4652321 ECH
Mepo1g00488 1 4651634 4652321 Mepo6g01805 6 20519042 20519699 PCT