Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00452 ATGGCGATTTTGCTTCGTAACACTTCCTTACTCACACGCTCTATATTCGCCGCTCAGGGTGTTAAACTAGGACTATCTTCCACTTTTCAGATTTTGCGCTTTTCATCCAAAGGTAGAAGGCGCTCTAAATCTGATGGAAGTGACTCAGGTGAAGAGAACATGTCTAAGAAAGATTTGGCCCTTAACCAAGCTCTTGATCAAATCACTTCTGCATTTGGAAAAGGATCTATCATGTGGCTTGGTCGCTCTGACACACCCAAAGATGTACCAGTTGTGTCTACAGGTTCTTTTGCTCTTGATATAGCACTAGGATGTGGTGGACTTCCAAAGGGACGTGTTGTGGAAATATACGGTCCAGAGGCTTCTGGGAAAACAACTCTTGCATTACATGTGATTGCAGAGGCGCAGAAGCAAGGAGGTTATTGTGTCTTTGTTGATGCTGAGCATGCCCTTGATAAGACACTTGCGGAGTCTATTGGTGTGAATACTCAGAACTTGCTTCTCTCACAACCAGATTGTGGTGAACAGGCACTTAGTCTCGTGGACACCTTAATCCGTAGTGGTTCAATTGATGTCATTGTTGTTGACAGTGTGGCTGCTCTTGTTCCTAAAGGTGAGCTGGATGGTGAGATGGGTGATGCTCACATGGCAATGCAGGCTCGGTTGATGAGCCAGGCACTTCGAAAATTGAGCCACTCCTTGTCACTTTCTCAAAGTATATTGATTTTTATAAACCAGGTAAGGTCAAAGATTTCTACATTTGGGGGATTTGGTGGGCCCACTGAAGTTACTTGTGGCGGTAATGCGTTGAAATTCTATGCTTCTGTGCGGCTTAATATTAAGAGAATAGGGTTTATCAAGAAGGGTGAAGAGGTTGTAGGAAGCCAGGTTCTTGTCAAGGTTGTGAAGAACAAGCTTTCCCCTCCATTTAAAACTGCCGAGTTTGAACTTCAATTTGGCAAGGGTATATGTAGAGAAGCAGAGATTATAAAGTTGAGCTTAAAATACAAATTCATCACAAAAGCCGGTTCTATGTATTATTATAACGAACATAATTTCCGCGGTGTGGATGCTCTCAAGAGTTTCCTAGCTGAGAATTGTAGTGCTTTAGAAGAACTAGAAATGAAGATCAGGGAGAAGCTTCTAAAACCCGAGACAGACAAGTTACCAGAGTCAGATGGAGATGTTACGGAAGAAATTGCTACCCTTGATTCTTCTACTGACGAAGACGCCGTAGCTGTTGTTGAAGCATGA 1254 0.4306 MAILLRNTSLLTRSIFAAQGVKLGLSSTFQILRFSSKGRRRSKSDGSDSGEENMSKKDLALNQALDQITSAFGKGSIMWLGRSDTPKDVPVVSTGSFALDIALGCGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDKTLAESIGVNTQNLLLSQPDCGEQALSLVDTLIRSGSIDVIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQSILIFINQVRSKISTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGFIKKGEEVVGSQVLVKVVKNKLSPPFKTAEFELQFGKGICREAEIIKLSLKYKFITKAGSMYYYNEHNFRGVDALKSFLAENCSALEELEMKIREKLLKPETDKLPESDGDVTEEIATLDSSTDEDAVAVVEA 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00452 417 Gene3D - 87 386 IPR027417 -
Mepo1g00452 417 FunFam Recombinase RecA 86 385 - -
Mepo1g00452 417 SMART AAA_5 110 284 IPR003593 GO:0016887
Mepo1g00452 417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 323 IPR027417 -
Mepo1g00452 417 SUPERFAMILY RecA protein, C-terminal domain 325 380 IPR023400 -
Mepo1g00452 417 ProSiteProfiles RecA family profile 1. 88 247 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Mepo1g00452 417 Pfam recA bacterial DNA recombination protein 60 323 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mepo1g00452 417 CDD RecA 88 325 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mepo1g00452 417 PANTHER RECA 34 394 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mepo1g00452 417 PRINTS RecA protein signature 218 247 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mepo1g00452 417 PRINTS RecA protein signature 266 294 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mepo1g00452 417 PRINTS RecA protein signature 146 175 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mepo1g00452 417 PRINTS RecA protein signature 180 209 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mepo1g00452 417 PRINTS RecA protein signature 299 328 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mepo1g00452 417 ProSitePatterns recA signature. 269 277 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Mepo1g00452 417 ProSiteProfiles RecA family profile 2. 257 328 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Mepo1g00452 417 NCBIfam recombinase RecA 57 379 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mepo1g00452 417 Hamap Protein RecA [recA]. 57 384 IPR013765 GO:0003697|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00452 Mepo-Chr1 4343058 4349004 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00452 K03553 - gmx:100781271 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00452 1 4343058 4349004 Mepo1g00452 1 4343058 4349004 ECH
Mepo1g00452 1 4343058 4349004 Mepo6g01743 6 19628812 19639180 PCT