Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3906 ATGGAAGATGAAGAATCACCACAACTCAAAAGTGTTGTTATAATTTCTCTTCCACCTTCAAATAACCCTTCTTTAGGCAAAACCATCACTGCTTTTACTTTCTACAACCCTTCTTCTCACCAACAACATCATCATCAACAACAACAACAACAACCTCAAAACAATGATCTTCCAATCCAAACCAACCCATCAAATCCTCAGCTTCAGTTTTCATTCACAAGACTCTTTCACATCACCCCAATAAAGCTTTTCACTTTCTTTGGTGTTTTTCTCTTTACCCTTTTTCTCTATGGTTATCTTTTTTCATCTACATCAACATTTGAACAACTACGTCGTCTCAAGAACAATGATGGTGATGATGAACCTAGTAGTATTCTGTTTCCATTGTTTCCAAAACAGGGTGTTCTTGGTCAGAGGGATTTGAAGCTGAAATTAGGGAAGATTGTTGATGTTAAAAAAAGGAACTTTATTGCTTCTAGCTCTAGGGTTGTGGATGTTGATTCATCTTCTACTGTTTTTCCAATCAGTGGCAATGTTTATCCAGATGGGTTGTATTACACACATTTACGAGTTGGAAACCCTCCTAAACGATATTTTGTTGACGTGGATACAGGGAGTGACTTAACTTGGATTCAGTGTGATGCTCCGTGCAGAAGTTGTGCGAAGGGAGCAAATGCCATATACAAGCCAACACTATCCAATATAGTACCATCCGTAGACTCTCTATGCTTGGAAGTTCAGAAAAATCAGAAGAATGGATATCATGAAAGTTTCCAACAGTGTGACTATGAAATTCATTATGCAGACCATAGTTCTTCCTTAGGAGTTCTTATTAAAGATGAGCTTCATCTTATGACTACTAATGGATCCAAAACCAAGTTAAATTTTGTTTTCGGGTGTGGATATGATCAAGAGGGCATGCTTTTGAACACATTGGCAAAAACAGATGGAATCATGGGACTGAGCAAGGCGAAAGTTGGCCTACCTTATCAGTTGGCAAGTAAAGGGCTTATTAAGAATGTCGTTGGTCATTGCTTAGGAAATGAAGGAGTTGGCGGTGGATACATGTTCTTAGGTGATGCTTTTGTGCCTTATTGGGGTATGACTTGGGTACCTATGGCCCAAACTACAGATTTATATCAAACTGAGACTCTTGGAATAAACTACGGAAATCGTCTGCTCAGTTTTGATGGAAACAGCAAAGTAGGAAAGGTGGTTTTTGATAGTGGCAGTTCTTATACATATTTTCCAAAAGAGGCGTACCAAGATCTTGTTGCTTCTCTTAAAGAAGTTTCTGGGTTGGGGCTCATTCAAGATGATTCAGACACAACTTTGCCAATTTGTTGGCAAGCTAATTTCCCAATCAGATCTGTCAAAGATGTCAAGGATTACTTCAAGACATTAACGCTTCGTTTTGGAAACAAATGGTGGATTTTGTCCACATTGTTTCGGATACCGCCGGAGGGTTACTTGATCATTAGTAACAAAGGCAATGTGTGCTTAGCTATTCTTGATGGTGGCAATGTAAATGATGGATCCTCGGTTATACTTGGAGACATTTCATTGCGAGGACATTTGGTAGTGTATGACAATGTGAACAAGAATATTGGTTGGGAAAGAACAAAATGTGGCATGCCAAGCAAAATATTGAAAAAGACTCACAATTTCTTAAGTGATAGTATGTTATGA 1689 0.3848 MEDEESPQLKSVVIISLPPSNNPSLGKTITAFTFYNPSSHQQHHHQQQQQQPQNNDLPIQTNPSNPQLQFSFTRLFHITPIKLFTFFGVFLFTLFLYGYLFSSTSTFEQLRRLKNNDGDDEPSSILFPLFPKQGVLGQRDLKLKLGKIVDVKKRNFIASSSRVVDVDSSSTVFPISGNVYPDGLYYTHLRVGNPPKRYFVDVDTGSDLTWIQCDAPCRSCAKGANAIYKPTLSNIVPSVDSLCLEVQKNQKNGYHESFQQCDYEIHYADHSSSLGVLIKDELHLMTTNGSKTKLNFVFGCGYDQEGMLLNTLAKTDGIMGLSKAKVGLPYQLASKGLIKNVVGHCLGNEGVGGGYMFLGDAFVPYWGMTWVPMAQTTDLYQTETLGINYGNRLLSFDGNSKVGKVVFDSGSSYTYFPKEAYQDLVASLKEVSGLGLIQDDSDTTLPICWQANFPIRSVKDVKDYFKTLTLRFGNKWWILSTLFRIPPEGYLIISNKGNVCLAILDGGNVNDGSSVILGDISLRGHLVVYDNVNKNIGWERTKCGMPSKILKKTHNFLSDSML* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3906 562 MobiDBLite consensus disorder prediction 39 63 - -
Mal8g3906 562 Pfam Xylanase inhibitor N-terminal 185 360 IPR032861 -
Mal8g3906 562 Gene3D Acid Proteases 366 545 IPR021109 -
Mal8g3906 562 ProSiteProfiles Peptidase family A1 domain profile. 185 539 IPR033121 -
Mal8g3906 562 SUPERFAMILY Acid proteases 177 543 IPR021109 -
Mal8g3906 562 PRINTS Pepsin (A1) aspartic protease family signature 515 530 IPR001461 GO:0004190|GO:0006508
Mal8g3906 562 PRINTS Pepsin (A1) aspartic protease family signature 405 416 IPR001461 GO:0004190|GO:0006508
Mal8g3906 562 PRINTS Pepsin (A1) aspartic protease family signature 191 211 IPR001461 GO:0004190|GO:0006508
Mal8g3906 562 PANTHER ASPARTYL PROTEASES 16 547 IPR001461 GO:0004190|GO:0006508
Mal8g3906 562 PANTHER ASPARTYL PROTEASE APCB1 16 547 - -
Mal8g3906 562 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 405 416 IPR001969 GO:0004190|GO:0006508
Mal8g3906 562 Pfam Xylanase inhibitor C-terminal 393 539 IPR032799 -
Mal8g3906 562 Gene3D Acid Proteases 160 360 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3906 Mal-Chr8 113249562 113255079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3906 168 543 Miscellaneous Gene Families AT1G77480 46.335 1.21e-107 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3906 - - cam:101497154 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3906 8 113249562 113255079 Mal8g3906 8 113249562 113255079 ECH