Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3893 ATGCCCCGTCGTAAACGGGAAAATCTCCCACGGGAAAGTTCAACCGGCGCATATCCGTCAAAGCGCAGAAAACATTCTAAGTTCGAATCTTCAAGCTCTAATCGTGGAGTATCTTCTTCATCTTCCAGGAAATGGGTTTTCTCTTCTGAAGATTATTCTGATTGCACTGATACGATTGTAGTTGTTTCCTACAATATACTCGGTGTTGAAAATGCATCAAATCATCTGGATTTGTATTCTAATATTGCAAGACGTTTCTTGGATTGGGGCAGACGTAAGAGGCTCATACTTGAAGAGATTAATAGCTATAATGCAAGCATACTCTGTTTCCAGGAGGTTGATCATTTTGATGATTTAGTTGATCTTTTTCAGAACAATGGCTTCAAAAGTGTTTACAAGGGTCGCACGGGAGAAGCAAATGATGGATGTGCTATATTTTGGAAAGACGAATTATTCAGTCTTTTGCATCAAGAAGATATAGAGTTCCAGAAATTTGGTCTGCGTAACAATGTTGCTCAGCTTTGTGTTTTGGAGGTAAACAATGATAATCCAGAATCTGACACATGTAAACTAACAGCAGAGGAACAATCCACCAGAAACAAAAGATTTGTAATAGGAAATATACATGTGCTGTTCAACCCTAACCGTGGTGATATCAAACTTGGCCAGGTCAGACTTTTAATTGATAAAGCTTACGAGTTATCACAAGAATGGGGCAACATCCCTGTTATTTTAGCTGGGGATTTGAACAGTATTCCACAGAGTGCAATATATGAATATCTGTCTTCATCCAAGTTAGACATCCAATTACATGATCGCAGAAATATGTCAGGACAGCTTGAAATCCGACCCAATCACAGAGAATTCAGATCGAACATTTCAATGTCTGTTTCAAGGAAGTTGCTACACAAATGGAGTGCGGAAGAACTAATCCTTGCAACTGGCGCAAAAGGAGTCACTCGTCTTCAGCACCAACTCAAGCTCCGCAGTGCTTATATCGGTGTCCCTGGAAAGCATAGAACAAGAGATGATATTGGGGAGCCCTTGGCAACATCGTACCACTCTAAGTTCATGGGAACAGTTGATTATATCTGGCATTCCGAGGAACTTACTCCGGTCAGAGTTCTTGAAACCTTACCCGTTGATGTTCTTAGAAGAACTAGAGGACTCCCTAACGAGAAATGGGGAAGTGATCACCTCGCTGTTGTATGTGAATTCGCCTTTGCAAAAAGTGATGAAAGTTCTGATTCTTCTGATCTTCCTTAG 1266 0.4068 MPRRKRENLPRESSTGAYPSKRRKHSKFESSSSNRGVSSSSSRKWVFSSEDYSDCTDTIVVVSYNILGVENASNHLDLYSNIARRFLDWGRRKRLILEEINSYNASILCFQEVDHFDDLVDLFQNNGFKSVYKGRTGEANDGCAIFWKDELFSLLHQEDIEFQKFGLRNNVAQLCVLEVNNDNPESDTCKLTAEEQSTRNKRFVIGNIHVLFNPNRGDIKLGQVRLLIDKAYELSQEWGNIPVILAGDLNSIPQSAIYEYLSSSKLDIQLHDRRNMSGQLEIRPNHREFRSNISMSVSRKLLHKWSAEELILATGAKGVTRLQHQLKLRSAYIGVPGKHRTRDDIGEPLATSYHSKFMGTVDYIWHSEELTPVRVLETLPVDVLRRTRGLPNEKWGSDHLAVVCEFAFAKSDESSDSSDLP* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3893 421 MobiDBLite consensus disorder prediction 1 40 - -
Mal8g3893 421 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 22 408 - -
Mal8g3893 421 MobiDBLite consensus disorder prediction 1 30 - -
Mal8g3893 421 Gene3D Endonuclease/exonuclease/phosphatase 33 418 IPR036691 -
Mal8g3893 421 PANTHER PROTEIN ANGEL 22 408 - -
Mal8g3893 421 Pfam Endonuclease/Exonuclease/phosphatase family 62 399 IPR005135 GO:0003824
Mal8g3893 421 SUPERFAMILY DNase I-like 56 409 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3893 Mal-Chr8 112976440 112981651 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3893 89 263 EF-hand Containing Proteins AT5G54130 25.543 6.32e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3893 - - gmx:100777474 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3893 8 112976440 112981651 Mal8g3893 8 112976440 112981651 ECH