Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3881 ATGAGTAGAAAGAAAAGGGTATTTTCCATTGAGAGTATTGAAGAGGTTGCTGTGGATTTCTTGAACTATCTTATGCAGGAGAAGCCAAAGATTCCATTTTTCATTCCAGTTATTTTGGTTGCTTGTGCTATTGAAAAATGGATCTTTTCTTTTTCCACTTGGGTTCCTCTTGCACTTGCTGTTTGGGCTACTATACAGTATGGAAGATACCAGCGCAAACTACTCGTGGAGGACTTGGATAAGAAATGGAAGCGAATTACATTGAATAACTCGCCCATCACACCATTGGAGCACTGTGAATGGCTCAATAAATTGTTGACAGAAATCTGGCCCAACTATTTTAACCCCAAGCTTTCATCAAGGTTATCGGCTGTAGTTGAGGCACGTTTGAAGCTCCGGAAACCAAGATTTCTTGAAAGAGTTGAACTGCAAGAGTTTTCACTAGGATCATGCCCTCCTAGCTTGGCCTTACAAGGAATGAGATGGTCAACTATCGGTGATCAGCGAGTCATGCAACTTGGTTTTGATTGGGACACCCATGAAATGAGCATTTTGCTTCTTGCTAAGCTTGCGAAGCCATTGATGGGAACTGCACGAATCGTTATTAACAGTCTTCATATCAAGGGAGATCTTATCTTTACGCCAATTTTAGATGGAAAAGCACTTTTATATTCGTTTGTATCAGCTCCTGAGGTGAGAGTAGGAGTTGCCTTCGGAAGCGGCGGAAGTCAGTCACTTCCAGCTACTGAGTGGCCTGGTGTTTCTTCTTGGCTGGAAAAACTTTTTACTGACACTTTGGTTAAAACCATGGTGGAACCTCGACGACGATGTTTCACTTTGCCTGCTGTTGATTTAAGAAAAAAGGCAGTTGGAGGCATCATATATGTTAGAGTGATTTCAGCAAATAAACTTTCTAGGAGTTCATTCAAGGCATCACGGAGGCAACAAAATGGATCAACCAATGGTTCTTCAGAAGACGTTTCTGACGACAAAGACCTACATACATTTGTAGAGGTAGAAATCGAAGAATTAACAAGGAGAACCGATGTCAGACTGGGTTCAACACCTAGATGGGATGCGCCATTTAATATGGTTTTGCATGACAATACAGGAACTCTTCGTTTAAATCTTTTTGAGTGTATTCCCAACAATGTGAAGTGTGACTATCTAGGAAGTTGTGAAATCAAGCTGAGGCATGTTGAAGATGATTCAACAATAATGTGGGCAGTAGGACCAGATTCTGGGGTTATAGCAAAGCAAGCGCAATTTTGTGGAGATGAAATTGAAATGGTTGTCCCATTTGAGGGTGCTAACTCTGGAGAGTTGAAGGTGAGCATTGTAGTAAAAGAGTGGCAATTTTCTGATGGAACACATAGTTTGAACAATTTCCGGAACAATTCTCAGCAGTCACTTAACGGATCATCAAATATTCAGTTAAGAACTGGAAAGAAACTTAAAATAACTGTTGTAGAAGGAAAGGATCTTGCTGCTGCAAAAGAAAAATCTGGAAAATTTGATCCATACATTAAATTGCAATATGGAAAGGTTATCCAGAAAACAAAAACTTCTCATACTCCAAATCCTGCATGGAATCAGACGATTGAATTCGATGAGATTGGTGGCGGTGAATACTTAAAACTAAAAGTATTTACCGAGGAACTTTTCGGAGACGAAAACATTGGTAGCGCACAAGTAAATTTGGAAGGACTGGTTGATGGTTCAGTCAGGGATGTATGGATCCCTCTAGAAAGAGTGCGTTCAGGAGAAATCAGACTTAAAATAGAAGCCGTAAAGGCGGACGACCAAGAAGGATCAATGGGTTCAGGCTCAGGAAATGGTTGGATAGAACTTGTTCTGATTGAAGGGAGGGATCTTGTTGCCGCCGATCTTAGAGGCACAAGTGATCCATATGTGAGGGTGCACTATGGAAACTTCAAGAAAAGGACAAAGGTTATTTACAAAACTCTAAACCCTCAATGGAACCAGACCTTAGAGTTCCCTGATGATGGAAGTCCCTTGATGCTTTATGTCAAGGACCATAACGCATTACTACCGACATCAAGTATAGGTGAATGTGCTGTAGAATATCAAAGGTTGCCTCCAAACCAGATGGCTGATAAGTGGATACCTCTTCAAGGTGTGAAAAGGGGTGAGATACACATCCAAATTACTAGAAAAGTTCCAGAAATGCAAAAGAGGCAAAGTATAGACTCTGAACCTTCTTTGAGTAAATTACACCAAATTCCTAGCCAGATAAAACAGATGATGATCAAATTTAGGTCTCAAATCGAAGATGGAAATCTTGATGGACTCTCTACAACATTGAGTGAGCTAGAAACTCTAGAGGATACACAAGAAGGATATGTAACTCAGCTAGAGACAGAACAAATGCTTCTTCTCAGCAAAATAAAGGAACTTGGCCAAGAGATTATTAATTCTTCTCCTTCTCCTCCCTTAAGCAGAAGATATTCTGAAAGTGTCAACTGA 2487 0.4045 MSRKKRVFSIESIEEVAVDFLNYLMQEKPKIPFFIPVILVACAIEKWIFSFSTWVPLALAVWATIQYGRYQRKLLVEDLDKKWKRITLNNSPITPLEHCEWLNKLLTEIWPNYFNPKLSSRLSAVVEARLKLRKPRFLERVELQEFSLGSCPPSLALQGMRWSTIGDQRVMQLGFDWDTHEMSILLLAKLAKPLMGTARIVINSLHIKGDLIFTPILDGKALLYSFVSAPEVRVGVAFGSGGSQSLPATEWPGVSSWLEKLFTDTLVKTMVEPRRRCFTLPAVDLRKKAVGGIIYVRVISANKLSRSSFKASRRQQNGSTNGSSEDVSDDKDLHTFVEVEIEELTRRTDVRLGSTPRWDAPFNMVLHDNTGTLRLNLFECIPNNVKCDYLGSCEIKLRHVEDDSTIMWAVGPDSGVIAKQAQFCGDEIEMVVPFEGANSGELKVSIVVKEWQFSDGTHSLNNFRNNSQQSLNGSSNIQLRTGKKLKITVVEGKDLAAAKEKSGKFDPYIKLQYGKVIQKTKTSHTPNPAWNQTIEFDEIGGGEYLKLKVFTEELFGDENIGSAQVNLEGLVDGSVRDVWIPLERVRSGEIRLKIEAVKADDQEGSMGSGSGNGWIELVLIEGRDLVAADLRGTSDPYVRVHYGNFKKRTKVIYKTLNPQWNQTLEFPDDGSPLMLYVKDHNALLPTSSIGECAVEYQRLPPNQMADKWIPLQGVKRGEIHIQITRKVPEMQKRQSIDSEPSLSKLHQIPSQIKQMMIKFRSQIEDGNLDGLSTTLSELETLEDTQEGYVTQLETEQMLLLSKIKELGQEIINSSPSPPLSRRYSESVN* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3881 828 MobiDBLite consensus disorder prediction 310 324 - -
Mal8g3881 828 MobiDBLite consensus disorder prediction 310 329 - -
Mal8g3881 828 ProSiteProfiles C2 domain profile. 586 709 IPR000008 -
Mal8g3881 828 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 293 406 IPR035892 -
Mal8g3881 828 PANTHER PLANT SYNAPTOTAGMIN 1 817 - -
Mal8g3881 828 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 484 596 IPR035892 -
Mal8g3881 828 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 606 724 IPR035892 -
Mal8g3881 828 SMART C2_3c 614 708 IPR000008 -
Mal8g3881 828 SMART C2_3c 484 579 IPR000008 -
Mal8g3881 828 SMART C2_3c 293 409 IPR000008 -
Mal8g3881 828 PANTHER OS01G0128800 PROTEIN 1 817 - -
Mal8g3881 828 Gene3D C2 domain 289 455 IPR035892 -
Mal8g3881 828 ProSiteProfiles C2 domain profile. 463 580 IPR000008 -
Mal8g3881 828 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 95 281 IPR031468 GO:0008289
Mal8g3881 828 CDD C2 615 711 - -
Mal8g3881 828 Pfam C2 domain 615 711 IPR000008 -
Mal8g3881 828 Pfam C2 domain 293 403 IPR000008 -
Mal8g3881 828 Pfam C2 domain 484 582 IPR000008 -
Mal8g3881 828 Gene3D C2 domain 468 598 IPR035892 -
Mal8g3881 828 Gene3D C2 domain 599 726 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3881 Mal-Chr8 112766709 112773580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3881 485 750 Lipid Metabolism Gene Families AT3G61300 23.323 3.67e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3881 - - gmx:100807475 1417.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3881 8 112766709 112773580 Mal8g3881 8 112766709 112773580 ECH
Mal7g5268 7 121976194 121982004 Mal8g3881 8 112766709 112773580 PCT