Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal8g3136 | ATGGCTCCTCCTGGAGGTCGTGGTGGTGGGTTCAGGGGAAGAGGAGGTGACAGAGGAGGAAGAGGTGGTGGTGGAGGTAGAGGTTTTGGTGGAGGAAGAGGAGGAGATTTTAAGCCTCGTGGTGGTGGTAGAGGTTTTGGAGGAGGCAGAGGAGCCCGTGGAGGAGGAAGGGGTGGTGGTCGTGGTGGTGGTAGAGGTGGAATGAAAGGAGGAAGCAAGGTTGTTGTTGAGCCTCATAGACATGAAGGTATTTTTATTGCAAAGGGTAAAGAAGATGCTCTTGTTACTAAGAATCTTGTTCCTGGTGAAGCTGTTTACAATGAGAAGAGAGTTTCCGTGCAGAATGAGGATGGTACAAAAGTTGAGTATAGAATTTGGAACCCTTTCCGATCGAAGTTAGCAGCTGCTGTCCTTGGTGGTGTTGACAACATATGGATTAAACCCGGTGCCAAAGTCCTTTACCTAGGAGCTGCTTCAGGAACAACCGTCTCTCATGTGTCTGATATTGTTGGTCCTACCGGAGTTGTCTATGCAGTAGAATTCTCGCATCGAAGTGGTCGTGACTTGGTTAACATGGCAAAAAAGCGTACTAATGTTATTCCCATTATTGAGGATGCTAGACATCCAGCAAAGTATAGAATGTTAGTTGGCATGGTAGATGTCATATTTTCTGATGTTGCTCAGCCTGATCAGGCAAGAATTTTAGGGCTGAATGCTTCATATTATCTCAAAGCTGGAGGACATTTTGTGATATCTATCAAGGCGAATTGCATAGATTCGACAGTTCCCGCTGAGGCAGTGTTCAGTAGTGAAGTGAACAAGTTGAAGGCAGATCAATTTAAGCCATTTGAGCAAGTTACTCTTGAACCATTTGAGAGGGACCATGCTTGTGTTGTTGGTGGATACAGAATGCCTAAGAAGAAAAAAGATGCTGAATAG | 939 | 0.4537 | MAPPGGRGGGFRGRGGDRGGRGGGGGRGFGGGRGGDFKPRGGGRGFGGGRGARGGGRGGGRGGGRGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNLVPGEAVYNEKRVSVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGAKVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILGLNASYYLKAGGHFVISIKANCIDSTVPAEAVFSSEVNKLKADQFKPFEQVTLEPFERDHACVVGGYRMPKKKKDAE* | 313 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal8g3136 | 312 | PANTHER | RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN | 7 | 311 | - | - | |
| Mal8g3136 | 312 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 74 | 300 | IPR029063 | - | |
| Mal8g3136 | 312 | PIRSF | Nop17p | 43 | 306 | IPR000692 | GO:0003723|GO:0006364|GO:0008168 | |
| Mal8g3136 | 312 | ProSitePatterns | Fibrillarin signature. | 174 | 188 | IPR020813 | GO:0003723|GO:0006364|GO:0008168 | |
| Mal8g3136 | 312 | Pfam | Fibrillarin | 76 | 303 | IPR000692 | GO:0003723|GO:0006364|GO:0008168 | |
| Mal8g3136 | 312 | MobiDBLite | consensus disorder prediction | 1 | 73 | - | - | |
| Mal8g3136 | 312 | PANTHER | FIBRILLARIN, S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED | 7 | 311 | - | - | |
| Mal8g3136 | 312 | Gene3D | Phosphorylase Kinase; domain 1 | 71 | 126 | - | - | |
| Mal8g3136 | 312 | PRINTS | Fibrillarin signature | 122 | 141 | IPR000692 | GO:0003723|GO:0006364|GO:0008168 | |
| Mal8g3136 | 312 | PRINTS | Fibrillarin signature | 149 | 170 | IPR000692 | GO:0003723|GO:0006364|GO:0008168 | |
| Mal8g3136 | 312 | PRINTS | Fibrillarin signature | 174 | 191 | IPR000692 | GO:0003723|GO:0006364|GO:0008168 | |
| Mal8g3136 | 312 | PRINTS | Fibrillarin signature | 229 | 258 | IPR000692 | GO:0003723|GO:0006364|GO:0008168 | |
| Mal8g3136 | 312 | PRINTS | Fibrillarin signature | 94 | 113 | IPR000692 | GO:0003723|GO:0006364|GO:0008168 | |
| Mal8g3136 | 312 | PRINTS | Fibrillarin signature | 281 | 302 | IPR000692 | GO:0003723|GO:0006364|GO:0008168 | |
| Mal8g3136 | 312 | PRINTS | Fibrillarin signature | 199 | 228 | IPR000692 | GO:0003723|GO:0006364|GO:0008168 | |
| Mal8g3136 | 312 | SMART | Fibrillarin_2 | 76 | 304 | IPR000692 | GO:0003723|GO:0006364|GO:0008168 | |
| Mal8g3136 | 312 | Gene3D | Vaccinia Virus protein VP39 | 127 | 304 | IPR029063 | - | |
| Mal8g3136 | 312 | Hamap | Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase [flpA]. | 90 | 303 | IPR000692 | GO:0003723|GO:0006364|GO:0008168 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal8g3136 | Mal-Chr8 | 85452461 | 85456729 | Dispersed/Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal8g3136 | K14563 | - | gmx:100814656 | 479.944 |
Event-related genes