Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2952 ATGACTTCTTCTTCTGGGTTTTCATTATATTCAACTGCAGAGGAAGTTACTCATGGGGTCGATGGGAGTGGCCTTACTGCAATTGTTACAGGAACAACAAATGGTATTGGCACTGAGACTGCACGAATTCTTGCCTTACGTGGTGTTCATGTGATAATGGGGGTGAGAAATGTTACTGCTGGAAAAATTGTTAGAGAAGCAATACTAAAGGAGATTCCAACAGCTAAAGTTGATGTGATGGAGTTAGATCTCAGTTCAATGGTATCTGTTAGAAAATTTGCATCAGAATTCAATTCCTCTGCTCTTCCATTGAACATTCTCATAAACAATGCAGGAATTTGTGCAGCACCTTTCAAACTGTCCAATGAGAACATTGAGCTACAATTTGCCACAAATTATTTAGGTCATTTTCTTTTAACAAATCTTTTGTTAGAGACAATGAAGAAAACATCAATTGAAAGCAAGAAAGAAGGAAGAATTATTAATGTCTCATCTGATGGTCACAACTATACATATCCTGAAGGAATCCTTTTTGATAAAATTAATGATGAATCAAGTTACCAGAGATGGAAGGCATATGGTCAATCTAAGCTTGCTAACATTTTACATGCTAATGAACTTGCAAGATATCTCAAGGAAGATGGGGTTAATATTACTGCAAATTCTCTTCATCCAGGATCTATTTTCACCAATATTGTAAGTCCTGAGGTTGGTCAAACTATCCCAAAAGGTCTAATAAATGTGCTAGGAGAATATGTAATGAAAACTATCCAGCAGGGAGCAGCAACAACATGCTATGTAGCATTGAACCCACAAGTGAAGGGTATAAGTGGAAAGTATTTTTCTGACAGTAATGTGGCTGAACCAAGCTCACAGGGAAAAGACACTGATTTGGCAAAGAAACTTTGGGATTTCAGCTTGAATTTAATTAAATAG 936 0.3665 MTSSSGFSLYSTAEEVTHGVDGSGLTAIVTGTTNGIGTETARILALRGVHVIMGVRNVTAGKIVREAILKEIPTAKVDVMELDLSSMVSVRKFASEFNSSALPLNILINNAGICAAPFKLSNENIELQFATNYLGHFLLTNLLLETMKKTSIESKKEGRIINVSSDGHNYTYPEGILFDKINDESSYQRWKAYGQSKLANILHANELARYLKEDGVNITANSLHPGSIFTNIVSPEVGQTIPKGLINVLGEYVMKTIQQGAATTCYVALNPQVKGISGKYFSDSNVAEPSSQGKDTDLAKKLWDFSLNLIK* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2952 311 Gene3D - 18 311 - -
Mal8g2952 311 PRINTS Glucose/ribitol dehydrogenase family signature 102 113 IPR002347 -
Mal8g2952 311 PRINTS Glucose/ribitol dehydrogenase family signature 26 43 IPR002347 -
Mal8g2952 311 PRINTS Glucose/ribitol dehydrogenase family signature 216 233 IPR002347 -
Mal8g2952 311 PRINTS Glucose/ribitol dehydrogenase family signature 152 168 IPR002347 -
Mal8g2952 311 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 3 311 - -
Mal8g2952 311 PANTHER RETINOL DEHYDROGENASE 3 311 - -
Mal8g2952 311 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 24 286 IPR036291 -
Mal8g2952 311 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 193 212 IPR002347 -
Mal8g2952 311 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 102 113 IPR002347 -
Mal8g2952 311 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 166 IPR002347 -
Mal8g2952 311 CDD retinol-DH_like_SDR_c_like 24 303 - -
Mal8g2952 311 Pfam short chain dehydrogenase 26 174 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2952 Mal-Chr8 79102753 79106974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2952 28 165 Acyl Lipid Metabolism Gene Families AT1G62610 29.932 3.53e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2952 - - cam:101490020 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2952 8 79102753 79106974 Mal8g2952 8 79102753 79106974 ECH