Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2917 ATGCTTTCTCTCACTAATTCGCCTCTACTTATAGCTAAATCTTACGAACAAATTAAAATCACAACTAAACGAAGCATTGTGGTATGTGCTGCTGCAAAAGGTCCAAGACCAAGATATCCACGAGTTTGGAAGAATAATAAAAAAATTGGAACCATTTCTAAGGCTGCTAAGCTTGTTCAATCTATTAAGGAACTGTCAAATGTCAAAGAGGAAGTTTATGGAGCTCTTGATACCTATGTTGCTTGGGAGCTAGAATTTCCTTTAATTACTGTGAAAAAGGTACTCAAGACTCTAGAATACGAGAAAGAATGGAAGCGGATAATACAGGTAACAAAATGGATGTTAAGCAAGGGTCAAGGAAAGACAATGGGAAGCTATTTTACATTACTTAATGCTTTAGCAGAGGATGACCGAGTTGACGAAGCAGAAGAGCTTTGGACAAAGTTGTTAATGCAGTACACGGAAAGCTTGCCTCGTAGATTCTTTGATAAAATGATATCTATCTACCGTAAAAGAAGTATGCATGACAAGATGTTTGAGGTATTTGCAGATATGGAGGAGCTTAGTGTTAAACCTAGTATTTCTGTTGTCTCAATAGTTGGAGATGTCTTCAAGGAGCTAGGTATGATGGATAAATACGAGAAGCTACATCAAAAATATCCACCGCCCCAATGGGAATATAGATACATCAAAGGAAAGCGCGTAAGAATCAAGGTGCAGGGTCAGCCTGATAAAATCGATAGATACATAAGAAAACATGACAATGTTCAACCAAGTTCAGGCTTAAGAGAGGATGATAGTTCGGAAGAGACTTCAGAGTTAACAGATGATGGACAACTCGAACAGGATGCCGATTTAATATGCATGGAAACCAAACAAATTTCAGATGAGTCATCTGAGTTTATGAAACCAAGTTTAGATGTATAA 927 0.3754 MLSLTNSPLLIAKSYEQIKITTKRSIVVCAAAKGPRPRYPRVWKNNKKIGTISKAAKLVQSIKELSNVKEEVYGALDTYVAWELEFPLITVKKVLKTLEYEKEWKRIIQVTKWMLSKGQGKTMGSYFTLLNALAEDDRVDEAEELWTKLLMQYTESLPRRFFDKMISIYRKRSMHDKMFEVFADMEELSVKPSISVVSIVGDVFKELGMMDKYEKLHQKYPPPQWEYRYIKGKRVRIKVQGQPDKIDRYIRKHDNVQPSSGLREDDSSEETSELTDDGQLEQDADLICMETKQISDESSEFMKPSLDV* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2917 308 Pfam PPR repeat 128 149 IPR002885 -
Mal8g2917 308 Pfam PPR repeat 165 188 IPR002885 -
Mal8g2917 308 PANTHER OS01G0757700 PROTEIN 3 283 IPR044646 -
Mal8g2917 308 PANTHER OS01G0757700 PROTEIN 3 283 - -
Mal8g2917 308 MobiDBLite consensus disorder prediction 248 268 - -
Mal8g2917 308 MobiDBLite consensus disorder prediction 248 285 - -
Mal8g2917 308 Gene3D Tetratricopeptide repeat domain 53 224 IPR011990 GO:0005515
Mal8g2917 308 TIGRFAM PPR: pentatricopeptide repeat domain 163 193 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2917 Mal-Chr8 77955735 77960525 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2917 - - mtr:MTR_6g053090 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2917 8 77955735 77960525 Mal8g2917 8 77955735 77960525 ECH