Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2551 ATGGCTGTTGGTATTCTTCTATGGCTGTTACTAGCTAAAGGTTTTGTCTTGGAAAGTGCAGTAGCTGTCACATTCTCTTCAAGGATTATTCACAGGTTTTCTGATGAAGCAATGGTTCATTTAAGGAACAATGGTGGTGGAAAGGTTCAATCATGGCCTAAAAAAGGGAGTTTTGAGTATTTCAGGTTGCTTATGAACAGTGACATGACACGTCAAAGGATGAAACTTGGTTCACAGGATCAATCTCTTTACCCTTCTGAGGGAAGTAAAACTTTCTTCTTGGGCAATGAATTTGCTATGTTACATTACACATGGATTGATATAGGGACTCCAAATGTTTCATTTCTTGTTGCATTGGACTCTGGTAGTGATATGCTTTGGGTCCCTTGTGATTGCATAGAATGTGCTCCTTTGTCAGCTGGACATTACAGTGTGTTGGAAAGGGATTTCAATCAGTTTAGCCCATCATTGTCAAGCACCAGTAGACATCTACCTTGCACGCATCAGTTGTGTGATCAAAATTCCAGTTGCAAAGGCTCTAAGGATCCTTGTCCTTATATTAAGAACTACGCATCAGATAATACATCAAGTTCTGGATATCTTATTGAAGACAAACTACATTTGGCATCCAATAATGCAACAAAGAATTCTGTACAAGCCTCTATCATTTTTGGTTGCGGTAGGAAACAAAGTGGCGGCTTTTTGGAAGGAGCTGCTCCTAATGGTTTGTTGGGGCTAGGACCTGGAAGCATTTCAGTCCCAGGTTTGCTGGCAAAGGCAGGGCTTATTCGGAATTCTTTCTCAATTTGTTTAAATGAGAATGGTTCGGGGAGAATTCTCTTTGGTGATCAAGGGCATGCCACCCAACAAAGATCTACTCCATTCTTGCTTGATGACGGGAAATTTGTGGCCTATATTGTTGGGGTAGAGAGGTTCTGTGTTGGGAGTTTCTGTCTCAAGGAAACTGAATTTAAAGCACTTATTGACACTGGAACATCTTTCACATATCTTCCTAAGGGTGTTTATGAAGCAGTTGTTGCAGAGTTTGATAAACAAGTACATGCAACCAGGATTACCTCTCAACAACTCCAATCGGACGAGTATTGCTATAATACCAGTTCACGGGAGTCAATAAACATTCCTCCGATGAAGCTCACTTTCTCTAAGAATCAATCTTTTATAATTCAAAACCCCATTTATATCGATCAGGAAGATACTACCATTTGTTTGGCTGTATTGCAGTCTGATGATGATTATATTACCATTGGACAAAACTTCCTGATGGGATATCACATGGTTTTTGATAGGGAGAATCTAAGGTTTGGCTGGTCTAGTTCCAATTGTGAAGATGGCATGGGAGACACGGCAAATTTTACGTCACCGTCCACCGGTGGATCATCAGACTCTATACCATCCAATCAACAGCAGCGTGTCCCCAATAATACTCGCGCTGTACCACCTGCCGTTGCTGGAAAGACATCCCCCAAACCCTCTGCAGCCACATCTGGACTTAACTCTTGGCATTTGTTAAATTCATTATCACTTATATGTCTTCTTTTGTTCCAGCAATTTGGTTAA 1578 0.41 MAVGILLWLLLAKGFVLESAVAVTFSSRIIHRFSDEAMVHLRNNGGGKVQSWPKKGSFEYFRLLMNSDMTRQRMKLGSQDQSLYPSEGSKTFFLGNEFAMLHYTWIDIGTPNVSFLVALDSGSDMLWVPCDCIECAPLSAGHYSVLERDFNQFSPSLSSTSRHLPCTHQLCDQNSSCKGSKDPCPYIKNYASDNTSSSGYLIEDKLHLASNNATKNSVQASIIFGCGRKQSGGFLEGAAPNGLLGLGPGSISVPGLLAKAGLIRNSFSICLNENGSGRILFGDQGHATQQRSTPFLLDDGKFVAYIVGVERFCVGSFCLKETEFKALIDTGTSFTYLPKGVYEAVVAEFDKQVHATRITSQQLQSDEYCYNTSSRESINIPPMKLTFSKNQSFIIQNPIYIDQEDTTICLAVLQSDDDYITIGQNFLMGYHMVFDRENLRFGWSSSNCEDGMGDTANFTSPSTGGSSDSIPSNQQQRVPNNTRAVPPAVAGKTSPKPSAATSGLNSWHLLNSLSLICLLLFQQFG* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2551 525 ProSiteProfiles Peptidase family A1 domain profile. 102 444 IPR033121 -
Mal8g2551 525 Pfam Xylanase inhibitor C-terminal 322 444 IPR032799 -
Mal8g2551 525 MobiDBLite consensus disorder prediction 452 497 - -
Mal8g2551 525 Gene3D Acid Proteases 90 283 IPR021109 -
Mal8g2551 525 PANTHER ASPARTYL PROTEASES 5 471 IPR001461 GO:0004190|GO:0006508
Mal8g2551 525 Gene3D Acid Proteases 284 450 IPR021109 -
Mal8g2551 525 MobiDBLite consensus disorder prediction 452 482 - -
Mal8g2551 525 PRINTS Pepsin (A1) aspartic protease family signature 108 128 IPR001461 GO:0004190|GO:0006508
Mal8g2551 525 PRINTS Pepsin (A1) aspartic protease family signature 326 337 IPR001461 GO:0004190|GO:0006508
Mal8g2551 525 PRINTS Pepsin (A1) aspartic protease family signature 420 435 IPR001461 GO:0004190|GO:0006508
Mal8g2551 525 Pfam Xylanase inhibitor N-terminal 103 283 IPR032861 -
Mal8g2551 525 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 326 337 IPR001969 GO:0004190|GO:0006508
Mal8g2551 525 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 117 128 IPR001969 GO:0004190|GO:0006508
Mal8g2551 525 CDD pepsin_like 106 443 IPR034164 -
Mal8g2551 525 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 5 471 - -
Mal8g2551 525 SUPERFAMILY Acid proteases 99 448 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2551 Mal-Chr8 58818344 58823554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2551 95 460 Miscellaneous Gene Families AT1G77480 25.897 2.56e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2551 - - lang:109359439 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2551 8 58818344 58823554 Mal8g2551 8 58818344 58823554 ECH