Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2524 ATGCTTTCTACCACACATGCATATGGGACACCAAATCAGAAGTTTCGACTAAAAGCTGTTAACCTTGGTGGTTGGTTGGTTACTGAAGGTTGGATCAAACCTTCTCTCTTCGATGCCATTCCAAATAAAGATTTCTTGGATGGATTTGGTCTTCAGTTCAAATCAGTGACAACAAAGAAATATTTGTGCGCAGAGTTTGGAGGAGGAACTATCCTTGTTGCAAACCGCACAACTGCTTCCGGTTGGGAAACATTTAAATTGTGGAGAATAAACAAGGAAACTTTCAAATTCAGGGTTTTTAACAAACAATTTGTGGGGTTAGATGGGATCAACGTTGTTGCTGTTTCTAATTCTTCTTTTGATTCTGAAACTTTTCATATTGTTAAGGAAAGTGACAATTCAAGCCGTGTTAGAATCAAAGCTTCAAATGGATACTTCCTACAGGCAAAGACGGAAGAGGTAGTGACTGCTGATGTATCATTGGTCTATGGATGGAGAAATGATGACCCAACCATTTTTGTAATGACAATTGCTGAAAGGATGCAAGGCGAATTCCAAGTAACAAATGGTTATGGGCCCAAAATAGCTCCACAAATAATGAAGGAACATTGGAGCAGTTTTATAGTTGAAGATGATTTCAAGTTCATAGCTAATAATGGACTAAATGCAGTTAGAATTCCTGTGGGTTGGTGGATAGCAAGTGACCCAACTCCGCCGTGGCCTTATGTTGCAGGTTCCTTGCACGCACTAGACAATGCATTTTTGTGGGCTAAAAAATATGGATTGAAAGTCATGATTGATCTTCATGCTGCACCTGATTCTCAAAATGGCTATGAGCATAGCTCTTCAAGAGACGGTTCACAAGAATGGGGCAAAACAGATGAAAGTATCAAACAAACTGTTCAAGTCATTGACTTCCTAACTGCAAGGTATGCAAAAAATCCAAGTCTTTATGCAGTTGAACTTATAAATGAACCACGATCACCTGGTGCAACACTAGAAAGTTTGAACAAATACTACAAGGATGGTTATGAAGCAGTGCGCAAGCACTCTTCTACTGTATTTGTGGTGTTGTCAAATAGATTAGGATCATCGATGCCTAGAGAATTTTTTCCTCTAGCTAATGGTCTTATGGGATCGGTGATTGATGTCCACTACTACAACACCTTTGGTGATGAGTTCAAAAACATGAGTGTTCAACAAAATATTGATTTCATCTACAATAATCGCTCATCGGAATTGAATTTTGTTACAACCTCAAATGGTCCACTTATTTTTGTCGGTGAATGGGTTGCTGAGTGGCAAGTAACAGGGGCTACAAAAGAAGACTACCAAAGATTTGGTAAAGCCCAACTAGATGTTTATGGACGAGCAACGTTTGGGTATGCTTATTGGGCTTTCAAGAACGTGAACAAACACTGGAGTCTGGAATGGATGATGAAGAATGGTTATATCAAGCTATAA 1464 0.3914 MLSTTHAYGTPNQKFRLKAVNLGGWLVTEGWIKPSLFDAIPNKDFLDGFGLQFKSVTTKKYLCAEFGGGTILVANRTTASGWETFKLWRINKETFKFRVFNKQFVGLDGINVVAVSNSSFDSETFHIVKESDNSSRVRIKASNGYFLQAKTEEVVTADVSLVYGWRNDDPTIFVMTIAERMQGEFQVTNGYGPKIAPQIMKEHWSSFIVEDDFKFIANNGLNAVRIPVGWWIASDPTPPWPYVAGSLHALDNAFLWAKKYGLKVMIDLHAAPDSQNGYEHSSSRDGSQEWGKTDESIKQTVQVIDFLTARYAKNPSLYAVELINEPRSPGATLESLNKYYKDGYEAVRKHSSTVFVVLSNRLGSSMPREFFPLANGLMGSVIDVHYYNTFGDEFKNMSVQQNIDFIYNNRSSELNFVTTSNGPLIFVGEWVAEWQVTGATKEDYQRFGKAQLDVYGRATFGYAYWAFKNVNKHWSLEWMMKNGYIKL* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2524 487 MobiDBLite consensus disorder prediction 274 294 - -
Mal8g2524 487 Pfam Cellulase (glycosyl hydrolase family 5) 198 469 IPR001547 GO:0004553|GO:0071704
Mal8g2524 487 PANTHER FASCIN 3 487 IPR010431 GO:0007015|GO:0051015
Mal8g2524 487 Gene3D Glycosidases 166 487 - -
Mal8g2524 487 SUPERFAMILY Actin-crosslinking proteins 52 162 IPR008999 -
Mal8g2524 487 PANTHER PUTATIVE-RELATED 3 487 - -
Mal8g2524 487 Gene3D - 28 165 - -
Mal8g2524 487 SUPERFAMILY (Trans)glycosidases 13 485 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2524 Mal-Chr8 57335414 57343558 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2524 - - gmx:100790619 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2524 8 57335414 57343558 Mal8g2524 8 57335414 57343558 ECH