Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2523 ATGAGTGGAGATCTGAAGAAAACTGCCTCTAATGGCCATGAGAAAATGTTAATACCTGAAGAACAGCAGGGAAAGATCAATGAGGTGAGAAAGCTAATAGGGCCATTGTCTGGTAAGGCATTGGTTTATTGTTCTGACGCATCCATCTCAAGGTATTTAAGGGCACGGAATTGGAACGTCAAAAAGGCAGTTAAAATGTTGAAGCAGACCCTTAAATGGAGAGCAGAATATAAACCAGAAGAGATCCGCTGGGAAGATGTTGCTCCTGAAGCAGAGACAGGAAAGATATACAGATCAAATTATATTGACAAGCATGGGAGGACAGTCCTTGTAATGAGACCTGCTCGGCAGAACACGAAATCAACAAAAGGACAAGTTAAGTATTTGGTGTACTGTATGGAGAATGCTATTCTAAATCTTCCACCAGGACAGGAACAGATGGTCTGGCTGATTGATTTCCAGGGTTTCAATATGTCACATATATCTATCAAAGTGACACGGGAAACTGCTCATGTATTACAAGACCATTATCCTGAAAGGCTGGGTCTGGCAATATTGTACAATCCTCCTAAAATCTTCGAACCGTTCTTCACGATGGTAAAGCCACTATTGGAGACCAAGACTTATAACAAAGTCAAGTTCGGTTATTCTGATGATCAGAACACCAAGAAGATTATGGAGGATTTGTTTGATTTGGACCATCTTGAATCTGCATTTGGTGGGAATGATAATGCACCATTTGACATTAATAAATATGGTGAGAGAATGAAAGAAGATGATAAGAAGATTCCTTCTTTCTGGACAAGGGAAAACTCTACATCTTCAGTCCCGATTGATGTTCCTTCTTTAGATTCAATTAATATAGACACAGATTCTGATGCCTCTGACAATGAGAAAATAGTTTCTTCTTCTGACTCAGTGACAGACACCGGCTTAGTCGACCCTGATCAAAACTTGGTTAATCAAGAGGAGCGGAATGTGAGTGCTGCTACGCATTAG 999 0.4034 MSGDLKKTASNGHEKMLIPEEQQGKINEVRKLIGPLSGKALVYCSDASISRYLRARNWNVKKAVKMLKQTLKWRAEYKPEEIRWEDVAPEAETGKIYRSNYIDKHGRTVLVMRPARQNTKSTKGQVKYLVYCMENAILNLPPGQEQMVWLIDFQGFNMSHISIKVTRETAHVLQDHYPERLGLAILYNPPKIFEPFFTMVKPLLETKTYNKVKFGYSDDQNTKKIMEDLFDLDHLESAFGGNDNAPFDINKYGERMKEDDKKIPSFWTRENSTSSVPIDVPSLDSINIDTDSDASDNEKIVSSSDSVTDTGLVDPDQNLVNQEERNVSAATH* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2523 332 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 1 304 - -
Mal8g2523 332 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
Mal8g2523 332 SUPERFAMILY CRAL/TRIO N-terminal domain 18 86 IPR036273 -
Mal8g2523 332 Pfam CRAL/TRIO domain 93 241 IPR001251 -
Mal8g2523 332 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 247 IPR001251 -
Mal8g2523 332 CDD SEC14 92 242 IPR001251 -
Mal8g2523 332 PANTHER GH16843P 1 304 - -
Mal8g2523 332 Pfam CRAL/TRIO, N-terminal domain 45 68 IPR011074 -
Mal8g2523 332 SUPERFAMILY CRAL/TRIO domain 84 262 IPR036865 -
Mal8g2523 332 MobiDBLite consensus disorder prediction 290 315 - -
Mal8g2523 332 PRINTS Cellular retinaldehyde-binding protein signature 197 216 - -
Mal8g2523 332 PRINTS Cellular retinaldehyde-binding protein signature 164 185 - -
Mal8g2523 332 PRINTS Cellular retinaldehyde-binding protein signature 48 70 - -
Mal8g2523 332 MobiDBLite consensus disorder prediction 299 315 - -
Mal8g2523 332 SMART sec14_4 90 244 IPR001251 -
Mal8g2523 332 Gene3D - 4 274 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2523 Mal-Chr8 57329532 57331719 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2523 - - gmx:100777106 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2523 8 57329532 57331719 Mal8g2523 8 57329532 57331719 ECH
Mal8g2523 8 57329532 57331719 Mal2g2551 2 32445103 32446942 PCT